Gene omics information

Query gene ID Zm.17316.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4455.7Zm.17316.1.A1_atCK369406--4e+0At5g38317LCR58 (Low-molecular-weight cysteine-rich 58)S.X.H.G.
0.7792.1Zm.405.1.A1_atAF037034.2hypothetical LOC541674-2e-1At5g05340peroxidase, putativeS.X.H.G.
0.6381.1Zm.13859.1.S1_atAF439724.1methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cylcohydrolase isoform 1-1e-12At3g12290tetrahydrofolate dehydrogenase/cyclohydrolase, putativeS.X.H.G.
0.5065.7Zm.6076.1.A1_a_atAY111015.1COX VIIa-like protein-3e-1At2g21195unknown proteinS.X.H.G.
0.4251.3Zm.5357.1.S1_atAI619398hypothetical protein LOC100273070-8e-4At1g03110transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.2928.1Zm.2952.1.A1_a_atCF629660hypothetical protein LOC100192920-2e-3At3g26680SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.599.3GSM258189Oh43xMo17 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
16.199.0GSM258185Oh43 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
14.798.9GSM258194Oh43 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
13.198.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.198.7GSM258188Oh43xB73 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.998.7GSM258197Oh43xB73 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.898.7GSM258180Oh43xMo17 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.698.7GSM258198Oh43xMo17 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.598.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.498.7GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.704e-109393Zm.244.2.A1_atCF630454--4e+0At5g38317LCR58 (Low-molecular-weight cysteine-rich 58)C.G.S.X.
0.662e-80297Zm.17950.1.A1_atCK827767--3e-1At2g03310unknown proteinC.G.S.X.
0.376e-65246Zm.17091.1.A1_atCF627429--1e+0At2g18780F-box family proteinC.G.S.X.
0.082e-961Zm.2020.1.A1_atAY105938.1hypothetical protein LOC100274480-1e-4At1g01470LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)C.G.S.X.
0.031e-136Zm.9942.1.A1_atCK368883hypothetical protein LOC100274544-8e-2At5g63740zinc finger protein-relatedC.G.S.X.
0.021e-136Zm.9840.1.A1_atCK826945--1e-1At1g08500plastocyanin-like domain-containing proteinC.G.S.X.
0.041e-136Zm.9747.2.S1_x_atCK370471--1e+1At5g67040unknown proteinC.G.S.X.
0.021e-136Zm.9715.1.A1_atAY106950.1hypothetical protein LOC100272777-3e-5At3g24360enoyl-CoA hydratase/isomerase family proteinC.G.S.X.
0.031e-136Zm.9319.1.A1_atCF627080hypothetical protein LOC100216855-2e+0At5g10000ATFD4 (ferredoxin 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt5g383173771358LCR58 (Low-molecular-weight cysteine-rich 58)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.---C.G.S.X.
0.043e-136Glycine maxPsAffx.C218000015_atPsAffx.C218000015--2e-1At4g11870unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareHZ01P19u_atHZ01P19u--1e+0At2g27390proline-rich family proteinC.G.S.X.
0.032e+034Oryza sativaOs02g0586900AK063583.1-Glycine rich family protein1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)C.G.S.X.
0.049e-238Populus trichocarpaPtpAffx.207543.1.S1_atpmrna14972hypothetical protein-2e-1At1g51930zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.712e-79295Triticum aestivumTa.27524.1.S1_atBT009169.1--4e+0At5g38720unknown proteinC.G.S.X.
0.037e-236Vitis vinifera1606552_atCB979569hypothetical protein LOC100251909-1e+0At1g20290unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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