Gene omics information

Query gene ID Zm.17309.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.17309.1.A1_atCK369677--4e+0At5g64680unknown proteinS.X.H.G.
0.8696.3Zm.7645.1.A1_atBM379053--5e+0At5g46300unknown proteinS.X.H.G.
0.6785.8Zm.3842.1.S1_atAW573375hypothetical protein LOC100277154-8e-1At1g26440ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)S.X.H.G.
0.6785.8Zm.9891.1.A1_atBM350582--1e+0At5g27290unknown proteinS.X.H.G.
0.5976.1Zm.17591.2.S1_atCK347917--2e-52At1g14670endomembrane protein 70, putativeS.X.H.G.
0.5571.6Zm.8375.1.A1_atBM080176--2e-2At5g25450ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeS.X.H.G.
0.4352.8ZmAffx.786.1.A1_atAI759096--3e-3At1g72450JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)S.X.H.G.
0.3233.4ZmAffx.566.1.A1_atAI714636--2e-1At5g05610AL1 (ALFIN-LIKE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.298.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.098.4GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
9.998.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.698.1GSM202285Mo17 11-day seedling aerial tissue biological replicate 3GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
8.398.0GSM202407Zmet2 study 11-day seedling aerial tissue genotype Mo17 zmet2-m1 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
8.298.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.198.0GSM202403Zmet2 study 11-day seedling aerial tissue genotype Mo17 zmet2-m1 Rep1GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
8.198.0GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.697.9GSM202406Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.930763Zm.17309.1.A1_s_atCK369677t-snare-4e+0At5g64680unknown proteinC.G.S.X.
0.291e-72272Zm.13196.1.S1_atAY105985.1t-snare-6e-2At5g59210myosin heavy chain-relatedC.G.S.X.
0.295e-50196ZmAffx.554.1.A1_atAI714384--6e-1At3g15280unknown proteinC.G.S.X.
0.295e-50196ZmAffx.554.1.S1_atAI714384--6e-1At3g15280unknown proteinC.G.S.X.
0.253e-33141Zm.10287.2.A1_atAI665655--8e-1At2g45250unknown proteinC.G.S.X.
0.253e-33141Zm.10287.2.S1_a_atAI665655--8e-1At2g45250unknown proteinC.G.S.X.
0.471e-32139ZmAffx.33.1.A1_atAI657429t-snare-2e-1At4g00890proline-rich family proteinC.G.S.X.
0.241e-32139ZmAffx.33.1.S1_atAI657429--2e-1At4g00890proline-rich family proteinC.G.S.X.
0.102e-31135Zm.7011.1.S1_s_atCA398268hypothetical protein LOC100191203-3e-19At4g21110G10 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt5g64680836589unknown proteinF:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOPF---C.G.S.X.
0.041e+034Glycine maxPsAffx.psMA004xM22f_atPsAffx.psMA004xM22f--3e+0At1g30135JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)C.G.S.X.
0.114e-23107Hordeum vulgareContig12377_atContig12377--2e-1At5g59210myosin heavy chain-relatedC.G.S.X.
0.107e-22105Oryza sativaOs03g0268100AK065357.1-Conserved hypothetical protein6e-2At5g59210myosin heavy chain-relatedC.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.221007.1.S1_atpmrna37532hypothetical protein-2e+0At4g28270zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.306e-27121Triticum aestivumTaAffx.85144.1.S1_atCA625231--3e-1At4g00890proline-rich family proteinC.G.S.X.
0.031e+032Vitis vinifera1616162_s_atCF517760--1e+0At5g19257unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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