Gene omics information

Query gene ID	Zm.17282.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	81.1	Zm.17282.1.S1_at	CK369877	-	-	1e+1	At5g32597	unknown protein	S.X.	H.G.	Please select
0.83	95.6	Zm.17277.1.S1_at	CF273093	-	-	1e-45	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	S.X.	H.G.	Please select
0.77	92.1	Zm.17278.1.S1_at	AI964531	-	-	3e-1	At4g25840	GPP1 (glycerol-3-phosphatase 1)	S.X.	H.G.	Please select
0.50	65.7	Zm.17276.1.S1_at	CF034932	-	-	2e+0	At5g13290	CRN (CORYNE)	S.X.	H.G.	Please select
0.50	65.7	Zm.17280.1.S1_at	CK369569	-	-	7e-2	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	S.X.	H.G.	Please select
0.40	48.5	Zm.7784.1.S1_at	BM079884	eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa	-	4e-2	At3g24506	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.2	99.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
12.4	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM206313	Upper pulvinus 5 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.9	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.3	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	7e-15	79	Zm.6209.1.S1_at	CO526554	secondary cell wall-related glycosyltransferase family 47	-	1e-58	At5g61840	GUT1	C.G.	S.X.	Please select
0.04	4e-1	34	Zm.6358.1.S1_at	CA402045	hypothetical protein LOC100273975 /// hypothetical protein LOC100274514	-	5e-18	At5g61840	GUT1	C.G.	S.X.	Please select
0.02	2e+0	32	Zm.5916.1.A1_at	AI665472	hypothetical protein LOC100216993	-	8e-1	At5g57887	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.15883.1.A1_at	BM268182	hypothetical protein LOC100192037	-	4e-1	At5g66380	ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1)	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.13616.1.A1_at	AY107497.1	senescence-associated protein	-	2e+0	At4g25315	Expressed protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.13616.1.S1_at	AY107497.1	-	-	2e+0	At4g25315	Expressed protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.12588.1.S1_at	CO530559	-	-	2e-1	At4g30440	GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)	C.G.	S.X.	Please select
0.02	6e+0	30	Zm.6874.2.S1_a_at	CF637577	hypothetical protein LOC100193230	-	3e-3	At2g45430	DNA-binding protein-related	C.G.	S.X.	Please select
0.02	6e+0	30	Zm.6874.2.S1_at	CF637577	-	-	3e-3	At2g45430	DNA-binding protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e+1	30	Arabidopsis thaliana	At5g32597	6240927	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e+0	32	Glycine max	Gma.13681.1.S1_at	AW156562	-	-	2e+1	At5g01910	unknown protein	C.G.	S.X.	Please select
0.10	5e-7	54	Hordeum vulgare	Contig5920_s_at	Contig5920	-	-	6e-5	At1g27440	GUT2	C.G.	S.X.	Please select
0.04	3e-2	40	Oryza sativa	Os.18736.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	Ptp.3105.2.S1_at	CK093569	hypothetical protein	-	5e-18	At5g61840	GUT1	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	4e-3	42	Triticum aestivum	TaAffx.113164.1.S1_at	CA617544	-	-	2e-4	At5g61840	GUT1	C.G.	S.X.	Please select
0.03	4e+0	30	Vitis vinifera	1616382_at	CF568793	-	-	1e+0	At5g26673	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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