CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.17215.1.A1_at

Gene name RING zinc finger protein-like

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 81.1 Zm.17215.1.A1_at CO523350 RING zinc finger protein-like - 2e+0 At5g51440 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) S.X. H.G.
0.55 71.6 Zm.14396.1.S1_at AF147726.1 photosystem I subunit d1 - 1e-3 At1g03130 PSAD-2 (photosystem I subunit D-2) S.X. H.G.
0.53 69.1 Zm.19061.1.A1_at CO532046 hypothetical protein LOC100193436 - 5e+0 At3g62370 unknown protein S.X. H.G.
0.50 65.7 Zm.15432.1.S1_at CA401222 - - 9e+0 At5g02080 DNA/panthothenate metabolism flavoprotein family protein S.X. H.G.
0.23 18.6 Zm.33.1.S1_s_at M12144.1 alpha zein 19kDa D1 /// alpha zein 19kDa D2 /// hypothetical protein LOC100101516 /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1A alpha zein protein - 7e-1 At1g18265 unknown protein S.X. H.G.
0.21 15.5 Zm.6106.1.S1_at AI670203 - - 8e-1 At5g37370 ATSRL1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.2 98.0 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.7 97.9 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.0 97.7 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.6 97.6 GSM206293 Right pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.8 97.2 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.3 96.9 GSM206334 Lower pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.3 96.9 GSM202298 B73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.2 96.9 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.2 96.9 GSM206298 Lower pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.7 96.5 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-5 50 Zm.8268.1.S1_at CK826607 thioredoxin M-type - 1e-1 At5g39950 ATTRX2 (THIOREDOXIN 2) C.G. S.X.
0.02 4e-5 48 Zm.394.1.S1_at U95180.1 hypothetical protein LOC100193093 - 2e-1 At1g23340 unknown protein C.G. S.X.
0.03 2e-4 46 Zm.6015.1.A1_at AI666198 - - 1e+0 At5g24570 unknown protein C.G. S.X.
0.02 7e-4 44 Zm.5111.1.A1_at AW506740 hypothetical protein LOC100193449 - 4e-36 At4g27690 VPS26B (VACUOLAR PROTEIN SORTING 26B) C.G. S.X.
0.02 7e-4 44 Zm.17628.1.S1_at CN845468 - - 6e-17 At2g34560 katanin, putative C.G. S.X.
0.03 3e-3 42 Zm.5464.1.A1_at AI622048 hypothetical protein LOC100272690 - 2e+0 At1g62790 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 1e-2 40 Zm.9811.1.A1_at BM351496 - - 1e+0 At3g50250 unknown protein C.G. S.X.
0.02 1e-2 40 Zm.6356.1.A1_at BM332624 trafficking protein particle complex subunit 4 - 1e-5 At5g02280 synbindin, putative C.G. S.X.
0.03 1e-2 40 Zm.19059.1.A1_at CO521551 hypothetical protein LOC100193008 - 4e-1 At1g78170 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g51440 835218 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) F:molecular_function unknown;P:response to heat;C:unknown;BPOAFM - - - C.G. S.X.
0.04 4e-5 50 Glycine max GmaAffx.87604.1.S1_at AW596527 - - 9e-1 At5g60360 AALP (Arabidopsis aleurain-like protease) C.G. S.X.
0.17 1e-30 133 Hordeum vulgare Contig15524_at Contig15524 - - 3e-1 At1g57730 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.10 9e-19 95 Oryza sativa Os08g0157400 AK108144.1 - Zn-finger, RING domain containing protein 4e-2 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.64845.1.S1_at BU817117 hypothetical protein - 8e-1 At1g21925 - C.G. S.X.
0.56 3e-147 521 Triticum aestivum TaAffx.8397.1.S1_at CA626111 - - 7e-1 At3g55880 unknown protein C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1616547_at BQ798895 hypothetical protein LOC100256265 - 5e-21 At5g23230 NIC2 (NICOTINAMIDASE 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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