CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.17192.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.17192.1.A1_at BM339467 - - 5e+0 At2g22520 unknown protein S.X. H.G.
0.61 79.5 Zm.18946.1.A1_at BM338625 hypothetical protein LOC100278262 - 1e+0 At1g69660 meprin and TRAF homology domain-containing protein / MATH domain-containing protein S.X. H.G.
0.60 77.8 Zm.9975.1.A1_at BM074697 - - 7e-6 At5g64200 ATSC35 S.X. H.G.
0.55 71.6 Zm.19212.1.S1_at BE238501 - - 1e-1 At1g06160 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) S.X. H.G.
0.40 48.5 Zm.18992.1.A1_at CO521210 - - 4e-1 At5g20370 serine-rich protein-related S.X. H.G.
0.25 21.3 Zm.6454.1.A1_at AY106137.1 PP1/PP2A phosphatases pleiotropic regulator PRL1 - 9e-29 At4g15900 PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
49.7 100.0 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
49.2 100.0 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
33.2 99.9 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
20.0 99.3 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
11.2 98.5 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
6.3 97.4 GSM320445 protocol: mRNA - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8 97.2 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6 97.1 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4 97.0 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5 96.3 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-2 38 Zm.8307.2.A1_a_at CF635305 - - 4e-1 At5g08150 unknown protein C.G. S.X.
0.03 4e-2 38 Zm.8307.2.A1_x_at CF635305 - - 4e-1 At5g08150 unknown protein C.G. S.X.
0.03 1e-1 36 Zm.11688.1.A1_at CK347476 esterase PIR7B - 2e+0 At5g08540 unknown protein C.G. S.X.
0.01 6e-1 34 Zm.18124.1.S1_at AY104334.1 hypothetical protein LOC100275630 - 1e+0 At1g32560 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein C.G. S.X.
0.02 2e+0 32 Zm.9556.1.A1_at BM382552 - - 4e-1 At5g63480 unknown protein C.G. S.X.
0.01 2e+0 32 Zm.4108.1.S1_at AI834735 hypothetical protein LOC100193257 - 2e-7 At3g47610 transcription regulator/ zinc ion binding C.G. S.X.
0.01 2e+0 32 Zm.17836.1.A1_at CK370651 60S ribosomal protein L31 - 4e-22 At5g56710 60S ribosomal protein L31 (RPL31C) C.G. S.X.
0.01 2e+0 32 Zm.17836.1.A1_x_at CK370651 60S ribosomal protein L31 - 4e-22 At5g56710 60S ribosomal protein L31 (RPL31C) C.G. S.X.
0.02 2e+0 32 Zm.14451.1.A1_at CK827403 hypothetical LOC542155 - 4e-2 At1g51200 zinc finger (AN1-like) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At2g22520 816785 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPF - - - C.G. S.X.
0.04 2e+0 34 Glycine max PsAffx.psZS012xL07f_at PsAffx.psZS012xL07f - - 9e-4 At2g31560 unknown protein C.G. S.X.
0.44 3e-58 224 Hordeum vulgare Contig19003_at Contig19003 - - 5e+0 At1g69180 CRC (CRABS CLAW) C.G. S.X.
0.29 1e-63 244 Oryza sativa Os.6157.1.S1_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.217372.1.S1_at pmrna32603 hypothetical protein - 1e+1 At5g62575 unknown protein C.G. S.X.
0.35 2e-45 182 Triticum aestivum Ta.21353.2.S1_at CA598488 - - 8e-2 At4g09620 - C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1613516_at CF208845 - - 4e+0 At5g26110 ATP binding / catalytic/ protein kinase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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