Gene omics information

Query gene ID Zm.17189.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.17189.1.A1_atBM268883--5e+0At5g60540PDX2 (PYRIDOXINE BIOSYNTHESIS 2)S.X.H.G.
0.8094.0Zm.7750.4.S1_atAW499152--3e-28At1g75780TUB1S.X.H.G.
0.6785.8Zm.14898.1.A1_x_atBM351319--4e+0At3g43800ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)S.X.H.G.
0.6077.8Zm.2548.1.A1_atAY106256.1--2e-26At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)S.X.H.G.
0.4048.5Zm.18084.1.A1_atCD997940--8e-7At1g16870mitochondrial 28S ribosomal protein S29-relatedS.X.H.G.
0.2216.9Zm.11611.1.A1_atBM379298hypothetical protein LOC100192942-5e+0At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.699.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
35.099.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.399.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.899.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.199.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.799.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.298.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.298.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.897.9GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-59228Zm.1380.1.A1_atBF733107--2e+1At5g28463unknown proteinC.G.S.X.
0.143e-21101Zm.18760.1.A1_atCO524410--1e+0At5g60660PIP2C.G.S.X.
0.025e-134Zm.3164.1.A1_atCF630670--3e-27At5g63400ADK1 (ADENYLATE KINASE 1)C.G.S.X.
0.032e+032Zm.9357.1.A1_atBM268323--1e+0At4g36060basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.012e+032Zm.7659.1.S1_atAY639019.1phosphate transport protein-5e-12At5g43360PHT3 (PHOSPHATE TRANSPORTER 3)C.G.S.X.
0.022e+032Zm.4615.1.A1_atAY078158.1Non-hemic monooxygenase-2e-44At2g29390SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2)C.G.S.X.
0.022e+032Zm.3645.1.A1_atCF244256glutamine amidotransferase subunit pdxT-1e-5At5g60540PDX2 (PYRIDOXINE BIOSYNTHESIS 2)C.G.S.X.
0.012e+032Zm.1821.1.A1_atBG840732--9e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)C.G.S.X.
0.012e+032Zm.13828.1.S1_atAY104425.1--5e-5At1g30040ATGA2OX2 (GIBBERELLIN 2-OXIDASE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e+032Arabidopsis thalianaAt5g60540836175PDX2 (PYRIDOXINE BIOSYNTHESIS 2)Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.---C.G.S.X.
0.023e-240Glycine maxPsAffx.C47000034_atPsAffx.C47000034--2e-1At4g18690unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareHY07C01u_atHY07C01u--5e-2At1g69780ATHB13C.G.S.X.
0.032e+034Oryza sativaOsAffx.15977.1.S1_s_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtp.998.1.A1_atCK089978--8e-1At4g16165Expressed proteinC.G.S.X.
0.045e+032Triticum aestivumTaAffx.57451.1.S1_atCA628962--7e+0At5g41071unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1615372_atCD800008hypothetical protein LOC100246884-3e+0At5g28052unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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