Gene omics information

Query gene ID	Zm.17093.1.S1_at
Gene name	hypothetical protein LOC100193332
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.17093.1.S1_at	CO523236	hypothetical protein LOC100193332	-	5e-2	At2g27260	-	S.X.	H.G.	Please select
0.50	65.7	ZmAffx.910.1.A1_at	AI770949	Growth-regulating factor 13-like	-	3e+0	At5g27910	NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8)	S.X.	H.G.	Please select
0.29	28.1	Zm.16286.1.A1_at	CO520397	-	-	5e-10	At2g23390	-	S.X.	H.G.	Please select
0.23	18.6	Zm.947.1.A1_at	BF733123	-	-	2e-2	At3g17180	scpl33 (serine carboxypeptidase-like 33)	S.X.	H.G.	Please select
0.22	16.9	Zm.18106.1.S1_at	AY367051.1	scarecrow-like 23	-	3e+1	At5g05550	transcription factor	S.X.	H.G.	Please select
0.15	8.6	Zm.13250.1.A1_at	AJ005338.1	Zea mays MADS14	-	3e-2	At2g03710	SEP4 (SEPALLATA 4)	S.X.	H.G.	Please select
0.07	2.9	Zm.9333.1.A1_at	BM347779	-	-	1e+0	At3g58720	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.9	99.2	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
17.6	99.1	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
17.1	99.1	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
14.4	98.9	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.9	98.7	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.8	98.7	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
12.4	98.7	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.1	98.4	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
10.0	98.4	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
9.1	98.2	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-3	42	Zm.9414.1.A1_at	BM337964	-	-	1e+0	At2g46320	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.01	5e-3	42	Zm.6450.1.S1_at	CF245049	cellulase containing protein	-	4e+0	At3g04890	unknown protein	C.G.	S.X.	Please select
0.01	5e-3	42	Zm.3338.1.S1_at	AY106121.1	-	-	1e+1	At5g20630	GER3 (GERMIN 3)	C.G.	S.X.	Please select
0.02	2e-2	40	Zm.13728.2.S1_at	AY106266.1	-	-	1e-14	At3g55500	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	C.G.	S.X.	Please select
0.02	2e-2	40	Zm.13728.2.S1_a_at	AY106266.1	alpha-expansin 4	-	1e-14	At3g55500	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.8941.1.A1_at	BM334004	hypothetical protein LOC100273259	-	2e-1	At5g02230	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.4943.1.A1_at	BG320867	hypothetical protein LOC100272864	-	1e-1	At4g27920	unknown protein	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.15673.1.A1_at	CO521248	hypothetical protein LOC100191542	-	7e+0	At2g32650	-	C.G.	S.X.	Please select
0.02	8e-2	38	Zm.15027.1.A1_at	BM268637	catalytic/ hydrolase	-	7e+0	At3g62040	catalytic/ hydrolase	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-2	40	Arabidopsis thaliana	At2g27260	817268	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PAMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	7e-2	40	Glycine max	PsAffx.CL1801Contig1_s_at	PsAffx.CL1801Contig1	-	-	9e-2	At1g32690	unknown protein	C.G.	S.X.	Please select
0.18	2e-27	123	Hordeum vulgare	HVSMEm0012K15r2_at	HVSMEm0012K15r2	-	-	7e-2	At1g76500	SOB3 (SUPPRESSOR OF PHYB-4#3)	C.G.	S.X.	Please select
0.47	5e-173	609	Oryza sativa	Os01g0931200	AK063586.1	-	ARM repeat fold domain containing protein	2e-1	At5g55850	NOI	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e-2	42	Populus trichocarpa	PtpAffx.215545.1.S1_at	pmrna29805	hypothetical protein	-	2e+0	At4g02690	glutamate binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	6e-11	69	Triticum aestivum	Ta.6382.1.A1_at	BQ170064	-	-	2e-1	At3g46940	deoxyuridine 5'-triphosphate nucleotidohydrolase family	C.G.	S.X.	Please select
0.02	9e-4	44	Vitis vinifera	1607367_at	CF203364.1	-	-	4e-4	At5g38240	serine/threonine protein kinase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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