CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.17087.1.S1_at

Gene name nonspecific lipid-transfer protein

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 81.1 Zm.17087.1.S1_at BM267086 nonspecific lipid-transfer protein - 1e+1 At3g10915 reticulon family protein S.X. H.G.
0.57 75.1 Zm.5757.1.A1_at AI637260 laccase 1 - 5e-4 At5g01040 LAC8 (laccase 8) S.X. H.G.
0.50 65.7 Zm.807.1.A1_at BG836005 hypothetical protein LOC100216722 - 5e-2 At4g14880 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) S.X. H.G.
0.50 65.7 Zm.6196.2.S1_at AI677134 - - 3e+0 At5g26880 tRNA/rRNA methyltransferase (SpoU) family protein S.X. H.G.
0.47 59.9 Zm.17701.1.S1_at CK370965 hypothetical protein LOC100278172 - 4e-1 At4g19400 actin binding S.X. H.G.
0.47 59.9 Zm.13808.2.A1_a_at AI665043 - - 4e-7 At4g03240 FH (FRATAXIN HOMOLOG) S.X. H.G.
0.22 16.9 Zm.9411.1.S1_at CA827391 SNF1-related protein kinase regulatory subunit beta-2 - 4e-1 At4g26150 CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.1 99.9 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
39.6 99.9 GSM375788 Deep-sowing 10d treatment Control, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
31.9 99.8 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
27.7 99.7 GSM385707 Deep-sowing 10d treatment IAA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
23.8 99.5 GSM375795 Deep-sowing 10d treatment Control, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
20.8 99.4 GSM385708 Deep-sowing 10d treatment IAA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
16.8 99.1 GSM375794 Deep-sowing 10d treatment UCZ, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
12.5 98.7 GSM375797 Deep-sowing 10d treatment UCZ, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
9.5 98.3 GSM375791 Deep-sowing 10d treatment GA3, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.8 97.6 GSM375796 Deep-sowing 10d treatment GA3, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 1e-4 46 Zm.930.1.A1_at BE129678 - - 5e+0 At5g06080 LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33) C.G. S.X.
0.02 2e+0 32 Zm.9491.1.A1_at BM338722 - - 1e-1 At1g69980 unknown protein C.G. S.X.
0.03 2e+0 32 Zm.9130.1.A1_at BM268570 - - 7e-2 At3g62220 serine/threonine protein kinase, putative C.G. S.X.
0.02 2e+0 32 Zm.2220.4.A1_a_at AY110053.1 Hypothetical protein LOC100216733 - 1e-1 At5g16500 protein kinase family protein C.G. S.X.
0.02 2e+0 32 Zm.2220.4.S1_at AY110053.1 hypothetical protein LOC100216733 - 1e-1 At5g16500 protein kinase family protein C.G. S.X.
0.01 2e+0 32 Zm.2220.3.S1_at CA826703 hypothetical protein LOC100273713 - 9e-4 At3g55450 protein kinase, putative C.G. S.X.
0.03 2e+0 32 Zm.1385.1.A1_at CF628524 hypothetical protein LOC100273765 - 6e-6 At5g17610 unknown protein C.G. S.X.
0.05 6e+0 30 ZmAffx.791.1.S1_at AI759133 Hypothetical protein LOC100192666 - 9e-1 At1g03660 - C.G. S.X.
0.05 6e+0 30 ZmAffx.791.1.A1_at AI759133 hypothetical protein LOC100192666 - 9e-1 At1g03660 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+1 30 Arabidopsis thaliana At3g10915 820262 reticulon family protein F:unknown;P:biological_process unknown;C:endoplasmic reticulum;P - - - C.G. S.X.
0.04 1e+0 34 Glycine max PsAffx.psHB007xK12f_at PsAffx.psHB007xK12f - - 2e-1 At1g56130 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.22 3e-11 67 Hordeum vulgare AF039024_at AF039024 - - 4e+0 At2g41260 M17 C.G. S.X.
0.17 1e-4 48 Oryza sativa Os03g0111300 AK062506.1 - Nonspecific lipid-transfer protein 2 (nsLTP2) (7kDa lipid transfer protein) 3e-1 At3g22275 unknown protein C.G. S.X.
0.03 3e-1 36 Populus trichocarpa PtpAffx.208466.1.S1_s_at pmrna16818 hypothetical protein - 1e-7 At3g06810 IBR3 (IBA-RESPONSE 3) C.G. S.X.
0.18 4e-9 61 Triticum aestivum Ta.22816.1.S1_x_at CD885331 type 2 non-specific lipid transfer protein precursor - 4e+0 At1g24510 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1620243_at CF512451 hypothetical protein LOC100245436 - 1e+0 At3g05940 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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