Gene omics information

Query gene ID	Zm.16934.1.A1_at
Gene name	transcriptional regulatory protein algP
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	85.8	Zm.16934.1.A1_at	AY108912.1	transcriptional regulatory protein algP	-	3e-1	At4g03580	-	S.X.	H.G.	Please select
0.91	99.0	Zm.354.2.S1_at	U37428.1	glossy1	-	5e-2	At4g19150	ankyrin repeat family protein	S.X.	H.G.	Please select
0.60	77.8	Zm.4619.2.A1_a_at	CK370334	hypothetical protein LOC100273548	-	5e-29	At4g31120	SKB1 (SHK1 BINDING PROTEIN 1)	S.X.	H.G.	Please select
0.55	71.6	Zm.12387.1.S1_at	AW000286	-	-	2e+1	Atmg01300	-	S.X.	H.G.	Please select
0.50	65.7	Zm.17115.1.S1_at	CN844978	-	-	1e+0	At5g67490	unknown protein	S.X.	H.G.	Please select
0.42	51.3	Zm.17270.1.S1_a_at	AF371274.1	zein-alpha precursor	-	5e-1	At1g06070	bZIP transcription factor, putative (bZIP69)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.8	98.8	GSM258535	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
13.1	98.7	GSM258531	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
10.8	98.5	GSM258536	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
10.2	98.4	GSM258532	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 1	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
9.3	98.2	GSM258538	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
8.8	98.1	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.0	98.0	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
7.1	97.7	GSM258533	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
6.6	97.6	GSM258534	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
5.9	97.3	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-4	44	Zm.19195.1.S1_at	AY105514.1	hypothetical protein LOC100274054	-	1e-2	At2g24450	FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.17167.1.A1_a_at	CK827572	hypothetical protein LOC100276673	-	6e-1	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	C.G.	S.X.	Please select
0.02	4e-2	38	Zm.17167.2.S1_at	AY106899.1	-	-	5e-1	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.949.1.A1_at	CF624182	-	-	1e-1	At5g15970	KIN2	C.G.	S.X.	Please select
0.01	6e-1	34	Zm.9519.1.A1_at	AY107523.1	hypothetical protein LOC100193889	-	9e-7	At2g25670	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.949.1.A1_s_at	CF624182	hypothetical protein LOC100280024	-	1e-1	At5g15970	KIN2	C.G.	S.X.	Please select
0.01	6e-1	34	Zm.9519.1.A1_a_at	AY107523.1	hypothetical protein LOC100193889	-	9e-7	At2g25670	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.6768.1.S1_at	AI396277	anther-specific proline-rich protein APG	-	2e-4	At1g29670	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.01	6e-1	34	Zm.652.1.S1_at	AY029559.1	methyl binding domain	-	2e-1	At5g17870	PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Arabidopsis thaliana	At4g03580	825658	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-2	40	Glycine max	PsAffx.psZO006iF03r_s_at	PsAffx.psZO006iF03r	-	-	1e+0	At5g46780	VQ motif-containing protein	C.G.	S.X.	Please select
0.16	7e-7	54	Hordeum vulgare	Contig609_at	Contig609	-	-	7e+0	At2g04420	nucleic acid binding	C.G.	S.X.	Please select
0.09	8e-13	75	Oryza sativa	Os07g0590800	AK062359.1	-	Hypothetical protein	1e+0	At5g61490	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e-1	36	Populus trichocarpa	Ptp.4184.1.S1_s_at	DN498936	-	-	1e+0	At3g53580	diaminopimelate epimerase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	2e-6	54	Triticum aestivum	Ta.27262.1.S1_a_at	CA652211	-	-	6e+0	At3g15300	VQ motif-containing protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1620014_at	CF210422	hypothetical protein LOC100261066	-	3e-13	At2g43340	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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