Gene omics information

Query gene ID Zm.16928.1.A1_at
Gene name Hypothetical protein LOC100216973
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9499.5Zm.16928.1.A1_atAI943619Hypothetical protein LOC100216973-1e+0At4g24440transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)S.X.H.G.
0.6279.8Zm.41.1.S1_atAI600908calcium dependent protein kinase1-1e-16At2g46700calcium-dependent protein kinase, putative / CDPK, putativeS.X.H.G.
0.5166.4Zm.13745.1.S1_atCK986027--2e-25At5g25150TAF5 (TBP-ASSOCIATED FACTOR 5)S.X.H.G.
0.4861.3Zm.10582.1.S1_atAY107371.1domain of unknown function DUF614 containing protein-8e-9At2g45010unknown proteinS.X.H.G.
0.4759.9Zm.14471.1.A1_a_atCF01721060S ribosomal protein L7-1-8e-31At2g4412060S ribosomal protein L7 (RPL7C)S.X.H.G.
0.4556.4Zm.6339.1.A1_atAI691450--3e-1At5g11930glutaredoxin family proteinS.X.H.G.
0.4455.7Zm.8632.1.A1_atBM268513--5e+0At3g55672-S.X.H.G.
0.4455.7ZmAffx.261.1.S1_atAI670366--8e-1At1g03440leucine-rich repeat family proteinS.X.H.G.
0.4251.3Zm.4166.1.A1_atBG841131hypothetical protein LOC100191831-1e+0At1g17145protein binding / zinc ion bindingS.X.H.G.
0.4149.7Zm.5102.1.S1_atAI600843hypothetical protein LOC100273584-9e-11At5g08020RPA70B (RPA70-KDA SUBUNIT B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.399.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.599.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.499.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.899.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.399.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.099.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.998.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.498.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.898.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-238Zm.6067.1.S1_atCA398401--6e-2At1g22990heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedC.G.S.X.
0.031e-136Zm.3442.1.A1_atAY103732.1hypothetical protein LOC100273117-9e-9At1g06680PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)C.G.S.X.
0.014e-134Zm.659.1.S1_atAF366297.1hypothetical protein LOC100191749-4e-3At1g69500electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingC.G.S.X.
0.034e-134Zm.14513.1.A1_atCA828306Histone H3.2-6e-37At1g09200histone H3C.G.S.X.
0.034e-134Zm.14513.5.S1_atCF633873Histone H3.2-3e-29At1g09200histone H3C.G.S.X.
0.034e-134Zm.14513.9.S1_atCA403750Histone H3.2-2e-9At5g10980histone H3C.G.S.X.
0.034e-134Zm.11688.1.A1_atCK347476esterase PIR7B-2e+0At5g08540unknown proteinC.G.S.X.
0.032e+032Zm.9892.1.A1_atBM351413--6e-3At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)C.G.S.X.
0.032e+032Zm.9490.1.A1_atBM381005hypothetical protein LOC100277225-5e+0At5g5795026S proteasome regulatory subunit, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt4g24440828546transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)F:RNA polymerase II transcription factor activity;P:transcription initiation from RNA polymerase II promoter;C:transcription factor TFIIA complex;MPFO---C.G.S.X.
0.021e+034Glycine maxPsAffx.C55000058_atPsAffx.C55000058--3e+0At4g25050ACP4 (acyl carrier protein 4)C.G.S.X.
0.191e-23109Hordeum vulgareContig17978_atContig17978--2e-2At3g47470LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)C.G.S.X.
0.121e-1791Oryza sativaOs09g0416600AK101668.1-Conserved hypothetical protein3e+0At1g12490F-box family protein-relatedC.G.S.X.
0.031e+034Populus trichocarpaPtpAffx.218067.1.S1_atpmrna33588hypothetical protein-4e+0At4g18335unknown proteinC.G.S.X.
0.175e-24111Triticum aestivumTa.4074.1.S1_atCA737052--3e-1At1g05970unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1617599_atCF373544hypothetical protein LOC100265390-2e-42At4g23400PIP1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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