Gene omics information

Query gene ID	Zm.1690.1.A1_at
Gene name	density-regulated protein
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.1690.1.A1_at	CK347441	density-regulated protein	-	4e-17	At5g11900	eukaryotic translation initiation factor SUI1 family protein	S.X.	H.G.	Please select
0.63	81.1	ZmAffx.848.1.A1_at	AI770631	-	-	8e-1	At1g22720	wall-associated kinase, putative	S.X.	H.G.	Please select
0.50	65.7	Zm.12462.1.A1_at	AW066887	hypothetical protein LOC100277431	-	8e-1	At5g45630	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.18515.1.A1_at	CF629792	hypothetical protein LOC100191462	-	1e+0	At1g16430	surfeit locus protein 5 family protein / SURF5 family protein	S.X.	H.G.	Please select
0.40	48.5	Zm.9952.1.A1_at	BM349898	-	-	6e+0	At5g46115	unknown protein	S.X.	H.G.	Please select
0.25	21.3	ZmAffx.917.1.S1_at	AI782944	-	-	1e+1	At5g26810	pectinesterase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.1	95.9	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.0	95.8	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.7	95.4	GSM206317	Right pulvinus control total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.6	95.2	GSM206311	Left pulvinus control total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM206313	Upper pulvinus 5 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206321	Lower pulvinus 30 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206328	Upper pulvinus 60 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM206319	Lower pulvinus 5 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.2	94.5	GSM206327	Upper pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.2	94.5	GSM206316	Upper pulvinus 60 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-2	38	Zm.6503.1.A1_at	CK370921	-	-	1e-1	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.8822.1.A1_at	AY105347.1	glycerol-3-phosphate acyltransferase 8	-	3e-19	At2g38110	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.4416.1.S1_at	AY536525.1	phospholipase C	-	5e-3	At5g58700	phosphoinositide-specific phospholipase C family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.3998.1.S1_at	AY108495.1	hypothetical protein LOC100278863	-	1e-5	At5g07500	PEI1	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.8702.1.A1_at	AI734669	-	-	5e-19	At1g04140	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.6672.1.S1_at	CF636709	Blue copper protein	-	4e-1	At1g72230	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.01	8e-1	34	Zm.6067.2.A1_at	CA401344	hypothetical protein LOC100277938	-	9e-4	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.502.1.S1_at	CD484967	GDP-mannose 4,6 dehydratase 2	-	5e-14	At5g66280	GMD1 (GDP-D-MANNOSE 4,6-DEHYDRATASE 1)	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.4385.1.S1_at	BQ487047	small nuclear ribonucleoprotein-associated protein B	-	3e-15	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-17	89	Arabidopsis thaliana	At5g11900	831063	eukaryotic translation initiation factor SUI1 family protein	F:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.23	2e-13	77	Glycine max	Gma.3989.2.S1_at	BF324200	-	-	2e-24	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please select
0.52	3e-102	371	Hordeum vulgare	Contig6231_at	Contig6231	-	-	4e-17	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please select
0.49	2e-113	410	Oryza sativa	Os01g0195500	CR282763	-	The start codon is not identified.	3e-13	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.22	6e-29	129	Populus trichocarpa	PtpAffx.206676.1.S1_at	pmrna13246	hypothetical protein	-	7e-43	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.47	2e-133	476	Triticum aestivum	Ta.1092.1.S1_at	CK210651	-	-	6e-26	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please select
0.23	1e-45	182	Vitis vinifera	1621221_at	CF403377	hypothetical protein LOC100252472	-	7e-28	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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