Gene omics information

Query gene ID	Zm.16861.2.S1_at
Gene name	L-ascorbate oxidase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	65.7	Zm.16861.2.S1_at	AW498347	L-ascorbate oxidase	-	7e-4	At1g55570	sks12 (SKU5 Similar 12)	S.X.	H.G.	Please select
0.75	90.8	Zm.157.1.S1_at	AY107763.1	catalase2	-	3e-22	At4g35090	CAT2 (CATALASE 2)	S.X.	H.G.	Please select
0.73	89.9	Zm.5008.1.A1_at	AY108557.1	hypothetical protein LOC100275589	-	2e-29	At5g54870	unknown protein	S.X.	H.G.	Please select
0.67	85.8	Zm.3623.1.S1_at	BG873827	hypothetical protein LOC100216808	-	7e+0	At5g52440	HCF106	S.X.	H.G.	Please select
0.60	77.8		-	-	-	0			S.X.	H.G.	Please select
0.59	76.1	ZmAffx.1315.1.S1_at	40794996-143	-	-	2e+0	At5g41080	glycerophosphoryl diester phosphodiesterase family protein	S.X.	H.G.	Please select
0.46	58.4	Zm.6927.2.A1_a_at	CF038958	hypothetical protein LOC100194137	-	1e-20	At5g05080	UBC22 (ubiquitin-conjugating enzyme 22)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
34.8	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.6	99.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.4	99.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.3	99.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.8	99.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.6	99.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.5	99.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.8	99.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.0	99.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.1	90.8	GSM320463	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	2202	Zm.16861.2.S1_a_at	AW498347	hypothetical protein LOC100194388 /// L-ascorbate oxidase	-	7e-4	At1g55570	sks12 (SKU5 Similar 12)	C.G.	S.X.	Please select
0.97	0	2202	Zm.16861.2.S1_x_at	AW498347	L-ascorbate oxidase	-	7e-4	At1g55570	sks12 (SKU5 Similar 12)	C.G.	S.X.	Please select
0.62	0	1487	Zm.16861.3.S1_at	BG901242	hypothetical protein LOC100194388	-	1e-9	At3g13390	sks11 (SKU5 Similar 11)	C.G.	S.X.	Please select
0.39	1e-80	299	Zm.2817.1.S1_at	CF008796	pollen-specific protein NTP303	-	1e-5	At3g13400	sks13 (SKU5 Similar 13)	C.G.	S.X.	Please select
0.03	2e-2	40	Zm.2817.2.A1_at	CB350638	hypothetical protein LOC100277525	-	7e+0	At5g66040	STR16 (SULFURTRANSFERASE PROTEIN 16)	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.6432.1.A1_a_at	BQ538326	hypothetical protein LOC100191156	-	7e-10	At5g64200	ATSC35	C.G.	S.X.	Please select
0.01	8e-2	38	Zm.6432.1.A1_at	BQ538326	hypothetical protein LOC100191156	-	7e-10	At5g64200	ATSC35	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.9186.1.A1_at	CB334436	hypothetical protein LOC100278549	-	3e+0	At3g55605	mitochondrial glycoprotein family protein / MAM33 family protein	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.8561.2.A1_a_at	BM332166	hypothetical protein LOC100277438	-	4e+0	At4g05070	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	7e-4	46	Arabidopsis thaliana	At1g55570	842006	sks12 (SKU5 Similar 12)	F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	PsAffx.C27000055_at	PsAffx.C27000055	-	-	2e+0	At2g24440	selenium binding	C.G.	S.X.	Please select
0.04	1e-3	44	Hordeum vulgare	Contig15994_at	Contig15994	-	-	1e-3	At4g22010	sks4 (SKU5 Similar 4)	C.G.	S.X.	Please select
0.45	5e-99	363	Oryza sativa	Os05g0485800	AK108702.1	-	Pollen-specific protein NTP303 precursor	6e-1	At3g13390	sks11 (SKU5 Similar 11)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	7e-8	59	Populus trichocarpa	PtpAffx.200003.1.S1_at	pmrna4	hypothetical protein	-	7e-23	At1g55560	sks14 (SKU5 Similar 14)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.44	2e-115	416	Triticum aestivum	Ta.4320.1.S1_at	BE498386	-	-	1e-8	At1g55570	sks12 (SKU5 Similar 12)	C.G.	S.X.	Please select
0.02	8e-1	34	Vitis vinifera	1618788_at	CA816218	hypothetical protein LOC100264616	-	1e+0	At2g38730	peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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