CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.16805.6.S1_x_at

Gene name ADP-ribosylation factor 1

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.75 90.8 Zm.16805.6.S1_x_at BG320419 ADP-ribosylation factor 1 - 2e-99 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) S.X. H.G.
0.53 69.1 Zm.14760.1.A1_at AY104289.1 Ubiquitin-conjugating enzyme E2 - 2e+0 At2g13980 nucleic acid binding S.X. H.G.
0.42 51.3 Zm.15683.1.A1_at CD440363 - - 2e-2 At1g27435 unknown protein S.X. H.G.
0.40 48.5 Zm.1779.1.A1_at CF020941 - - 1e+1 At5g64020 unknown protein S.X. H.G.
0.40 48.5 Zm.6480.2.S1_at AI065715 - - 1e-11 At5g64200 ATSC35 S.X. H.G.
0.40 48.5 Zm.15490.1.A1_at CD448845 subtilisin-chymotrypsin inhibitor CI-1B - 4e+0 At5g38930 germin-like protein, putative S.X. H.G.
0.33 36.0 Zm.10380.1.S1_at AY109011.1 hypothetical protein LOC100216776 - 8e-7 At3g55960 NLI interacting factor (NIF) family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.5 92.6 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.5 92.6 GSM206296 Lower pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.4 92.2 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.4 92.2 GSM206291 Upper pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.4 92.2 GSM206295 Lower pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.4 92.2 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.3 91.7 GSM206298 Lower pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.2 91.3 GSM206292 Upper pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.2 91.3 GSM206297 Lower pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.1 90.8 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 1594 Zm.16805.6.S1_a_at BG320419 ADP-ribosylation factor 1 /// ADP-ribosylation factor 1 - 2e-99 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) C.G. S.X.
0.60 0 977 Zm.16805.7.A1_at AI621974 ADP-ribosylation factor 1 - 4e-98 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) C.G. S.X.
0.60 0 977 Zm.16805.7.A1_x_at AI621974 ADP-ribosylation factor 1 - 4e-98 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) C.G. S.X.
0.46 3e-173 607 Zm.71.1.A1_at AY104152.1 ADP-ribosylation factor homolog1 - 3e-76 At5g14670 ATARFA1B (ADP-ribosylation factor A1B) C.G. S.X.
0.46 4e-169 593 Zm.16805.1.A1_at AI737061 - - 2e-105 At1g70490 ARFA1D C.G. S.X.
0.42 5e-141 500 Zm.6331.1.S1_at CO523745 - - 6e-118 At1g70490 ARFA1D C.G. S.X.
0.42 9e-121 432 Zm.16805.2.A1_at CF635679 hypothetical protein LOC100216623 - 1e-106 At2g47170 ARF1A1C C.G. S.X.
0.03 6e-5 48 Zm.12954.1.A1_at AW066601 ADP-ribosylation factor - 1e-26 At2g18390 TTN5 (TITAN 5) C.G. S.X.
0.05 5e-2 38 Zm.17117.1.A1_at CK144396 hypothetical protein LOC100191770 - 2e+0 At3g01500 CA1 (CARBONIC ANHYDRASE 1) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 2e-99 363 Arabidopsis thaliana At1g10630 837606 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. - - - C.G. S.X.
0.45 3e-92 339 Glycine max Gma.6298.1.S1_x_at BM309168 - - 9e-123 At1g23490 ATARF1 (ADP-RIBOSYLATION FACTOR 1) C.G. S.X.
0.50 0 702 Hordeum vulgare Contig181_s_at Contig181 - - 2e-102 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) C.G. S.X.
0.53 0 791 Oryza sativa Os07g0223400 AF012896.1 - ADP-ribosylation factor 2e-123 At2g47170 ARF1A1C C.G. S.X.
0.45 3e-77 289 Populus trichocarpa PtpAffx.21710.4.S1_at CV270392 hypothetical protein - 7e-114 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) C.G. S.X.
0.56 0 751 Triticum aestivum Ta.17314.1.S1_at CA619547 - - 3e-31 At1g10630 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F) C.G. S.X.
0.44 1e-94 345 Vitis vinifera 1616740_s_at BQ792710 similar to ADP-ribosylation factor - 3e-110 At5g14670 ATARFA1B (ADP-ribosylation factor A1B) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage