CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.16779.1.A1_at

Gene name hypothetical protein LOC100216924

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.16779.1.A1_at CF626512 hypothetical protein LOC100216924 - 2e-3 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) S.X. H.G.
0.73 89.9 Zm.11653.1.A1_at CF243979 hypothetical protein LOC100191865 - 6e+0 At3g07460 unknown protein S.X. H.G.
0.67 85.8 Zm.8357.1.A1_at BM267266 - - 1e-4 At3g62020 GLP10 (GERMIN-LIKE PROTEIN 10) S.X. H.G.
0.67 85.8 Zm.14983.2.A1_at AY109416.1 - - 3e-5 At5g27150 NHX1 (NA+/H+ EXCHANGER) S.X. H.G.
0.50 65.7 Zm.10261.1.A1_at BM501576 - - 4e-20 At5g62410 SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) S.X. H.G.
0.23 18.6 ZmAffx.807.1.S1_at AI770389 - - 3e+0 At1g65650 UCH2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.1 94.3 GSM206313 Upper pulvinus 5 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.0 94.0 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.0 94.0 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.0 94.0 GSM206318 Lower pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.7 93.2 GSM206319 Lower pulvinus 5 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.7 93.2 GSM253267 ZM_4d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
2.7 93.2 GSM206322 Lower pulvinus 60 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.7 93.2 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
2.6 92.9 GSM253277 ZM_8d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
2.5 92.6 GSM206312 Upper pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 1273 Zm.16779.1.A1_a_at CF626512 hypothetical protein LOC100216924 /// hypothetical protein LOC100273958 - 2e-3 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.54 0 646 Zm.16779.3.S1_at AI691600 hypothetical protein LOC100273958 - 7e-6 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.33 1e-39 163 Zm.16779.2.A1_at BM075463 - - 3e-11 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.07 1e-17 89 Zm.8997.1.A1_at AY106532.1 hypothetical protein LOC100272754 - 2e-9 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.04 1e-5 50 Zm.17110.1.S1_at CF972406 - - 5e+0 At5g53560 CB5-E (CYTOCHROME B5 ISOFORM E) C.G. S.X.
0.07 1e-5 50 Zm.1388.1.A1_at CK827610 - - 7e-6 At1g26340 CB5-A (CYTOCHROME B5 ISOFORM A) C.G. S.X.
0.02 1e-2 40 Zm.990.1.A1_at CF636054 - - 1e+1 At5g44345 F-box family protein-related C.G. S.X.
0.03 1e-2 40 Zm.17572.1.A1_at BM269508 - - 1e-10 At5g46020 unknown protein C.G. S.X.
0.09 1e-2 40 Zm.1710.1.S1_at AY106827.1 - - 2e-9 At5g53560 CB5-E (CYTOCHROME B5 ISOFORM E) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 2e-3 44 Arabidopsis thaliana At5g48810 834939 CB5-D (CYTOCHROME B5 ISOFORM D) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation. - - - C.G. S.X.
0.25 2e-12 73 Glycine max Gma.1186.1.S1_s_at CD411934 - - 3e-11 At2g32720 CB5-B (CYTOCHROME B5 ISOFORM B) C.G. S.X.
0.43 3e-108 391 Hordeum vulgare Contig2285_at Contig2285 - - 3e-11 At2g32720 CB5-B (CYTOCHROME B5 ISOFORM B) C.G. S.X.
0.45 1e-116 420 Oryza sativa Os01g0971500 AK120840.1 - Cytochrome b5 7e-6 At5g53560 CB5-E (CYTOCHROME B5 ISOFORM E) C.G. S.X.
0.13 5e-4 46 Populus trichocarpa PtpAffx.5159.3.S1_at AJ780094 hypothetical protein - 4e-16 At2g32720 CB5-B (CYTOCHROME B5 ISOFORM B) C.G. S.X.
0.57 2e-151 535 Triticum aestivum TaAffx.84978.1.S1_at CA627126 - - 5e-6 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.22 1e-10 65 Vitis vinifera 1614327_at CB036097 hypothetical protein LOC100248225 - 1e-10 At2g32720 CB5-B (CYTOCHROME B5 ISOFORM B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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