Gene omics information

Query gene ID Zm.16562.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1Zm.16562.1.S1_atCO530845--6e-3At2g17220protein kinase, putativeS.X.H.G.
0.7389.9RPTR-Zm-J01636-1_atRPTR-Zm-J01636-1--0S.X.H.G.
0.7188.2RPTR-Zm-X17220-1_atRPTR-Zm-X17220-1--0S.X.H.G.
0.7087.0Zm.15903.2.A1_atBM266872--2e-11At3g10340PAL4 (Phenylalanine ammonia-lyase 4)S.X.H.G.
0.6986.5Zm.144.1.S1_x_atU10696.1metallothionein2-2e+1At5g38344transmembrane receptorS.X.H.G.
0.6785.8RPTR-Zm-J01347-4_atRPTR-Zm-J01347-4--0S.X.H.G.
0.6381.1Zm.12244.2.S1_atAI668243--9e-1At5g46940invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.5267.3Zm.15807.1.A1_atAY111212.1--1e+0At4g19590DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.5166.4Zm.17312.1.A1_atCK369501--5e+0At5g39700MYB89 (myb domain protein 89)S.X.H.G.
0.4556.4Zm.1079.4.S1_x_atAY109373.1--2e-2At5g14740CA2 (CARBONIC ANHYDRASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.099.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
34.499.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.599.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.799.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.599.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.399.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.699.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.499.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.698.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.897.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-1063Zm.1140.1.S1_atBM073428hypothetical protein LOC100279272-4e-14At3g49670BAM2 (BARELY ANY MERISTEM 2)C.G.S.X.
0.071e-859Zm.8505.1.A1_atAY107567.1--1e-4At1g51870protein kinase family proteinC.G.S.X.
0.057e-754Zm.9130.1.A1_atBM268570--7e-2At3g62220serine/threonine protein kinase, putativeC.G.S.X.
0.047e-754Zm.4702.1.A1_atCA401021--9e-3At4g36180leucine-rich repeat family proteinC.G.S.X.
0.033e-652Zm.10520.1.S1_atBQ529214hypothetical protein LOC100274894-2e-4At4g20940leucine-rich repeat family proteinC.G.S.X.
0.044e-548Zm.19324.1.A1_atCK986141hypothetical protein LOC100279823-6e-3At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)C.G.S.X.
0.042e-446Zm.2717.1.A1_atCK347342--6e-6At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.032e-446Zm.1188.1.A1_atBE512438--6e-1At3g08680leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.037e-444Zm.6011.1.A1_atAI738205hypothetical protein LOC100280191-2e-10At1g34420leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-342Arabidopsis thalianaAt2g17220816227protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA---C.G.S.X.
0.064e-550Glycine maxGmaAffx.46686.1.S1_atBQ081277--1e-5At1g07570APK1AC.G.S.X.
0.404e-70264Hordeum vulgareContig25812_atContig25812--6e-4At1g74490protein kinase, putativeC.G.S.X.
0.272e-50200Oryza sativaOs06g0727400AK069558.1-Probable serine/threonine-protein kinase NAK (EC2.7.1.37)9e-7At2g17220protein kinase, putativeC.G.S.X.
0.098e-342Populus trichocarpaPtpAffx.213906.1.S1_x_atpmrna27116hypothetical protein-7e-9At3g28690protein kinase, putativeC.G.S.X.
0.438e-92337Triticum aestivumTa.24300.1.S1_atCA668229--3e-5At1g26970protein kinase, putativeC.G.S.X.
0.068e-959Vitis vinifera1616189_atCF511570hypothetical protein LOC100260741-6e-18At1g75820CLV1 (CLAVATA 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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