CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.16532.2.A1_at

Gene name 60S ribosomal protein L18a

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.0 Zm.16532.2.A1_at AW331554 60S ribosomal protein L18a - 4e-69 At3g14600 60S ribosomal protein L18A (RPL18aC) S.X. H.G.
0.91 99.0 ZmAffx.1020.1.A1_at AI881536 - - 3e-7 At1g75640 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
0.77 92.1 Zm.2806.1.A1_a_at AW067337 - - 6e-1 At2g41660 MIZ1 (mizu-kussei 1) S.X. H.G.
0.53 69.1 Zm.384.1.A1_at AF001635.1 physical impedance induced protein2 - 6e+0 At5g03100 F-box family protein S.X. H.G.
0.50 65.7 Zm.9791.1.S1_at AY110405.1 hypothetical protein LOC100216896 - 1e-78 At3g52580 40S ribosomal protein S14 (RPS14C) S.X. H.G.
0.50 65.7 Zm.5194.1.A1_at BM269267 - - 1e-3 At2g46070 MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.0 94.0 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.8 93.5 GSM205431 Mo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
2.7 93.2 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6 92.9 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6 92.9 GSM205368 B73xMo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.6 92.9 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 0 910 Zm.16532.4.S1_at BI423682 - - 7e-68 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.60 0 910 Zm.16532.4.S1_x_at BI423682 60S ribosomal protein L18a - 7e-68 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.56 3e-148 523 Zm.16532.3.A1_x_at BM380477 60S ribosomal protein L18a - 2e-64 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.54 1e-147 521 Zm.16532.1.A1_a_at BM074770 60S ribosomal protein L18a - 5e-44 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.54 1e-147 521 Zm.16532.1.A1_x_at BM074770 60S ribosomal protein L18a - 5e-44 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.40 4e-33 141 Zm.15602.1.S1_at CA399213 - - 3e-5 At3g14600 60S ribosomal protein L18A (RPL18aC) C.G. S.X.
0.16 2e-4 46 Zm.8692.1.A1_at BM337497 - - 5e-6 At3g14600 60S ribosomal protein L18A (RPL18aC) C.G. S.X.
0.03 3e-3 42 Zm.997.1.A1_at CF059773 hypothetical protein LOC100275923 - 1e+0 At2g17040 anac036 (Arabidopsis NAC domain containing protein 36) C.G. S.X.
0.02 3e-3 42 Zm.9247.1.A1_at BG842289 hypothetical protein LOC100280369 - 5e-20 At2g35630 MOR1 (MICROTUBULE ORGANIZATION 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.52 4e-69 262 Arabidopsis thaliana At3g14600 820688 60S ribosomal protein L18A (RPL18aC) F:structural constituent of ribosome;P:N-terminal protein myristoylation, translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, membrane;MOFP - - - C.G. S.X.
0.41 2e-37 157 Glycine max GmaAffx.177.1.S1_at CD402378 - - 6e-40 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.54 7e-168 589 Hordeum vulgare Contig184_at Contig184 - - 6e-102 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.66 4e-126 452 Oryza sativa Os01g0666900 NM_191921.1 - Ribosomal L18ae protein family protein 1e-65 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.43 7e-50 198 Populus trichocarpa PtpAffx.45930.1.S1_at CF237173 hypothetical protein - 1e-75 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.55 7e-145 513 Triticum aestivum Ta.26789.1.S1_at CD491181 - - 2e-61 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
0.47 4e-51 200 Vitis vinifera 1608129_at CF372430 hypothetical protein LOC100265789 - 1e-87 At2g34480 60S ribosomal protein L18A (RPL18aB) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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