CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.16505.1.A2_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.16505.1.A2_at CF633865 - - 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) S.X. H.G.
0.67 85.8 Zm.18993.1.S1_at CO528827 - - 3e-3 At2g10950 BSD domain-containing protein S.X. H.G.
0.53 69.1 Zm.15863.1.A1_at BM078830 - - 6e-3 At5g49030 OVA2 (ovule abortion 2) S.X. H.G.
0.50 65.7 Zm.13658.1.A1_at AY107148.1 hypothetical protein LOC100193262 - 1e+0 At3g50350 unknown protein S.X. H.G.
0.46 58.4 Zm.2427.1.S1_at AY108148.1 hypothetical protein LOC100217316 - 1e-3 At2g43970 La domain-containing protein S.X. H.G.
0.15 8.6 Zm.17816.2.S1_a_at CK144883 tRNA pseudouridine synthase family protein - 2e-2 At1g76120 tRNA pseudouridine synthase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.4 94.9 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.2 94.5 GSM162265 Wild type 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.1 94.3 GSM202290 Mo17 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.0 94.0 GSM202295 Mo17xB73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8 93.5 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
2.7 93.2 GSM202296 B73xMo17 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.6 92.9 GSM202297 Mo17 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.5 92.6 GSM202292 B73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.4 92.2 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
2.4 92.2 GSM206318 Lower pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 4238 Zm.16505.1.A1_at BG841073 hypothetical protein LOC100272368 - 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.61 0 2125 Zm.16505.3.A1_at CF019822 - - 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.67 0 1816 Zm.16525.1.A1_at CF627777 - - 7e-129 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.68 0 1752 Zm.16525.2.S1_a_at CF633541 deoxy xylulose synthase 2 - 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.20 9e-105 381 Zm.16525.3.A1_x_at AI738309 deoxy xylulose synthase 2 - 7e-44 At5g56010 HSP81-3 C.G. S.X.
0.03 2e-6 54 Zm.5048.6.A1_a_at BM380925 hypothetical protein LOC100279926 /// endoplasmin - 3e-36 At4g24190 SHD (SHEPHERD) C.G. S.X.
0.03 2e-6 54 Zm.5048.6.A1_at BM380925 endoplasmin - 3e-36 At4g24190 SHD (SHEPHERD) C.G. S.X.
0.02 4e-5 50 Zm.687.2.S1_at AI001320 hypothetical protein LOC100279992 - 8e-36 At2g04030 CR88 C.G. S.X.
0.01 4e-5 50 Zm.687.2.A1_at AY106328.1 - - 8e-36 At2g04030 CR88 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.67 0 950 Arabidopsis thaliana At5g56030 835701 HSP81-2 (HEAT SHOCK PROTEIN 81-2) a member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. - - - C.G. S.X.
0.55 0 965 Glycine max Gma.17525.1.S1_at BG839191 - - 0 At5g56000 heat shock protein 81-4 (HSP81-4) C.G. S.X.
0.69 0 2121 Hordeum vulgare Contig1204_s_at Contig1204 cytosolic heat shock protein 90 - 0 At5g56010 HSP81-3 C.G. S.X.
0.69 0 2020 Oryza sativa Os09g0482100 AB111810.1 - Heat shock protein 82 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.54 0 850 Populus trichocarpa Ptp.1433.1.S1_at CV237152 hypothetical protein - 0 At5g56010 HSP81-3 C.G. S.X.
0.69 0 1703 Triticum aestivum Ta.217.1.S1_x_at U55859.1 heat shock protein 80 - 0 At5g56030 HSP81-2 (HEAT SHOCK PROTEIN 81-2) C.G. S.X.
0.46 0 702 Vitis vinifera 1618009_at CD714666 similar to heat shock protein 90 - 0 At5g56000 heat shock protein 81-4 (HSP81-4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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