Gene omics information

Query gene ID Zm.16459.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.16459.1.S1_atAY111971.1--5e+0At5g01075beta-galactosidaseS.X.H.G.
0.4352.8ZmAffx.568.1.A1_atAI714643--1e+1At5g01734unknown proteinS.X.H.G.
0.4048.5Zm.2267.1.S1_atAY105804.1--7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)S.X.H.G.
0.1710.6Zm.18974.1.A1_atBQ539399hypothetical protein LOC100272472-3e-1At1g17147-S.X.H.G.
0.125.9Zm.13551.1.A1_atAY108205.1--2e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)S.X.H.G.
0.083.4ZmAffx.151.1.S1_atAI667841--2e-10At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.599.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.499.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.399.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.299.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.999.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.799.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.199.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.599.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.298.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.498.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9501182Zm.16459.1.A1_atAY111971.1--5e+0At5g01075beta-galactosidaseC.G.S.X.
0.021e-136Zm.5791.1.A1_atAY103953.1suppressor of G2 allele of SKP1-9e-7At4g23570SGT1AC.G.S.X.
0.021e-136Zm.10004.1.A1_atBM351289hypothetical protein LOC100278883-2e+0At1g32540LOL1 (LSD ONE LIKE 1)C.G.S.X.
0.025e-134Zm.3633.6.S1_atCF005633APx1 - Cytosolic Ascorbate Peroxidase-5e-29At1g07890APX1 (ascorbate peroxidase 1)C.G.S.X.
0.025e-134Zm.19239.1.A1_atCO529234hypothetical protein LOC100191783-2e+0At1g72310ATL3C.G.S.X.
0.022e+032Zm.5966.1.A1_atBG268635--3e-5At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)C.G.S.X.
0.032e+032Zm.17955.2.A1_a_atCK347228--5e+0At4g32530vacuolar ATP synthase, putative / V-ATPase, putativeC.G.S.X.
0.022e+032Zm.10081.1.A1_a_atBQ538388hypothetical protein LOC100277294-3e-2At2g45260unknown proteinC.G.S.X.
0.022e+032Zm.10081.1.A1_atBQ538388--3e-2At2g45260unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Arabidopsis thalianaAt5g01075831885beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:endomembrane system, beta-galactosidase complex;P---C.G.S.X.
0.032e+034Glycine maxGmaAffx.79584.2.S1_s_atBG042813--8e-7At4g33945armadillo/beta-catenin repeat family proteinC.G.S.X.
0.032e+032Hordeum vulgareHVSMEm0019L18r2_atHVSMEm0019L18r2--5e+0At5g06790unknown proteinC.G.S.X.
0.044e-1169Oryza sativaOs.22857.1.A1_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.223843.1.S1_s_atpmrna42062hypothetical protein-9e-1At5g42880unknown proteinC.G.S.X.
0.043e-136Triticum aestivumTaAffx.89521.1.S1_x_atAJ610926--1e+1At5g18250unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1617808_atCF568855--1e+0At5g03170FLA11C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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