Gene omics information

Query gene ID Zm.16394.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.16394.1.S1_atCF272871--1e-1At2g03470myb family transcription factor / ELM2 domain-containing proteinS.X.H.G.
0.8094.0Zm.5851.6.A1_a_atL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)S.X.H.G.
0.6179.5Zm.17374.2.A1_a_atCF637833--1e+0At3g43490zinc knuckle (CCHC-type) family proteinS.X.H.G.
0.5571.6Zm.5908.1.A1_atAW424447hypothetical protein LOC100273971-2e-2At1g11890SEC22S.X.H.G.
0.4048.5Zm.6142.1.A1_atAY105151.1annexin p33-2e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)S.X.H.G.
0.2622.7Zm.5796.2.S1_atAY107655.1--3e-18At5g66420-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.397.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.097.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.596.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.494.9GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
3.494.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.294.5GSM320442protocol: mRNA - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.363e-1995ZmAffx.697.1.A1_atAI737808--3e+0At4g27745-C.G.S.X.
0.233e-1995ZmAffx.697.1.S1_atAI737808--3e+0At4g27745-C.G.S.X.
0.019e-134Zm.5646.1.A1_a_atBM347849hypothetical protein LOC100191650-2e-25At1g04760ATVAMP726C.G.S.X.
0.019e-134Zm.5646.2.A1_x_atAW257823hypothetical protein LOC100191650-3e-41At1g04750VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)C.G.S.X.
0.019e-134Zm.13318.1.S1_atCA828001eukaryotic peptide chain release factor subunit 1-1-9e-96At1g12920ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2)C.G.S.X.
0.024e+032ZmAffx.575.1.A1_atAI714774--1e-2At1g77590LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9)C.G.S.X.
0.024e+032Zm.6451.2.S1_a_atAI770434--2e-4At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)C.G.S.X.
0.024e+032Zm.6451.2.A1_atAI770434--1e-2At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)C.G.S.X.
0.014e+032Zm.6451.1.S1_atAY107195.1--2e-11At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Arabidopsis thalianaAt2g03470814876myb family transcription factor / ELM2 domain-containing proteinF:DNA binding;P:unknown;C:nucleus;OMFBPVA---C.G.S.X.
0.042e-138Glycine maxGmaAffx.74758.1.S1_atBI316983MYB transcription factor MYB150-8e+0At5g50330ATP binding / protein kinaseC.G.S.X.
0.061e-344Hordeum vulgareContig24769_atContig24769--4e+0At4g10767SCRL21 (SCR-Like 21)C.G.S.X.
0.041e-346Oryza sativaOs03g0425800AK100427.1-MYBY2 protein (Fragment)3e-1At2g03470myb family transcription factor / ELM2 domain-containing proteinC.G.S.X.
0.075e-240Populus trichocarpaPtpAffx.209126.1.S1_atpmrna18056hypothetical protein-7e-1At2g03470myb family transcription factor / ELM2 domain-containing proteinC.G.S.X.
0.202e-1997Triticum aestivumTa.6368.1.A1_atCD910839--4e-2At2g03470myb family transcription factor / ELM2 domain-containing proteinC.G.S.X.
0.034e-238Vitis vinifera1617721_atCF568847--1e-76At5g56030HSP81-2 (HEAT SHOCK PROTEIN 81-2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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