Gene omics information

Query gene ID	Zm.162.1.A1_x_at
Gene name	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.68	86.1	Zm.162.1.A1_x_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	S.X.	H.G.	Please select
0.90	97.0	Zm.17307.1.S1_at	CK367910	-	-	4e+0	At2g30370	allergen-related	S.X.	H.G.	Please select
0.88	96.7	Zm.15688.1.S1_at	CF630538	-	-	5e-1	At4g27330	SPL (SPOROCYTELESS)	S.X.	H.G.	Please select
0.88	96.7	Zm.3357.1.A1_at	BM347858	hypothetical protein LOC100273400	-	1e+0	At4g11020	unknown protein	S.X.	H.G.	Please select
0.86	96.3	Zm.17306.1.A1_at	CK348204	-	-	6e+0	At5g26890	unknown protein	S.X.	H.G.	Please select
0.86	96.3	Zm.3358.2.A1_at	AY105740.1	-	-	7e+0	At2g44420	protein N-terminal asparagine amidohydrolase family protein	S.X.	H.G.	Please select
0.81	94.3	Zm.3545.1.A1_at	BM267030	translation initiation factor 5A	-	4e-20	At1g69410	ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)	S.X.	H.G.	Please select
0.81	94.3	Zm.13002.1.S1_at	CF041204	-	-	1e-10	At4g27230	HTA2 (histone H2A)	S.X.	H.G.	Please select
0.76	91.1	Zm.13401.1.A1_at	AF457954.1	-	-	4e-19	At1g48850	EMB1144 (embryo defective 1144)	S.X.	H.G.	Please select
0.71	88.2	Zm.7414.1.A1_at	BM078319	-	-	5e+0	At1g63830	proline-rich family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.9	98.7	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
12.2	98.6	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
10.5	98.4	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
10.4	98.4	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.8	98.3	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.7	98.3	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.9	97.9	GSM206324	Upper pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.4	97.8	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.8	97.6	GSM375796	Deep-sowing 10d treatment GA3, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.8	97.6	GSM206327	Upper pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.92	0	2198	Zm.162.1.A1_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.62	0	741	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.49	0	716	Zm.14951.1.S1_x_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.49	0	716	Zm.14951.1.S1_a_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.36	0	716	Zm.14951.1.A1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.49	0	716	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.47	2e-73	276	Zm.14951.2.S1_x_at	BG837389	-	-	9e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.01	9e-2	38	Zm.13065.1.A1_at	CD437453	sarcosine oxidase	-	5e-5	At2g24580	sarcosine oxidase family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Zm.17959.1.A1_at	CK827746	hypothetical protein LOC100276601	-	5e-3	At5g23950	C2 domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	36	Arabidopsis thaliana	At5g66370	836769	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	Gma.7405.1.A1_at	BU547481	-	-	8e-11	At2g38060	PHT4	C.G.	S.X.	Please select
0.03	2e+0	34	Hordeum vulgare	Contig13998_at	Contig13998	-	-	2e+0	At1g36240	60S ribosomal protein L30 (RPL30A)	C.G.	S.X.	Please select
0.12	3e-14	81	Oryza sativa	Os04g0418800	AK064039.1	-	Pistil-specific extensin-like protein familyprotein	7e-1	At1g75830	LCR67	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e-1	38	Populus trichocarpa	PtpAffx.208494.1.S1_s_at	pmrna16869	hypothetical protein	-	4e-2	At5g61510	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	0	908	Triticum aestivum	TaAffx.112283.1.S1_at	CA622230	-	-	6e+0	At5g66370	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Vitis vinifera	1607593_at	CF515318	hypothetical protein LOC100260987	-	1e-1	At2g27250	CLV3 (CLAVATA3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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