Gene omics information

Query gene ID Zm.16049.1.S1_at
Gene name 40S ribosomal protein S28
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.16049.1.S1_atBM88863740S ribosomal protein S28-8e-5At5g0385040S ribosomal protein S28 (RPS28B)S.X.H.G.
0.6785.8Zm.6894.1.A1_atBM380620--7e-47At1g69830AMY3 (ALPHA-AMYLASE-LIKE 3)S.X.H.G.
0.6381.1Zm.6195.1.A1_x_atAI668513hypothetical protein LOC100275106-4e+0At4g17790-S.X.H.G.
0.3336.0Zm.17513.1.A1_atBM074532MFP1 attachment factor 1-5e+0At1g22840CYTC-1 (CYTOCHROME C-1)S.X.H.G.
0.2928.1Zm.5825.1.A1_atAI649790hypothetical protein LOC100279429-1e-2At1g10390nucleoporin family proteinS.X.H.G.
0.2828.1Zm.1693.1.A1_atBM382165--4e-3At3g55670-S.X.H.G.
0.2014.2ZmAffx.485.1.A1_atAI691349--8e-1Atmg00140-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.398.5GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
8.698.1GSM258201Wf9 11-day seedling aerial tissue biological replicate 1GSE10237Gene expression variation among eight maize inbreds
8.698.1GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
8.598.1GSM253252ZM_24h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
8.098.0GSM323171Zm_SG200Dpep1_24hpi_IIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
7.697.9GSM258202B14a 11-day seedling aerial tissue biological replicate 2GSE10237Gene expression variation among eight maize inbreds
7.597.8GSM258204Wf9 11-day seedling aerial tissue biological replicate 2GSE10237Gene expression variation among eight maize inbreds
7.197.7GSM258207Wf9 11-day seedling aerial tissue biological replicate 3GSE10237Gene expression variation among eight maize inbreds
6.997.7GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
6.697.6GSM253266ZM_4d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.920856Zm.16049.1.S1_x_atBM88863740S ribosomal protein S28-8e-5At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.433e-153539Zm.16049.3.S1_atCF635696Ribosomal protein S28-1e-4At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.402e-111400Zm.16049.2.A1_x_atCF042888--3e-4At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.292e-111400Zm.16049.4.A1_atBE475781--1e-4At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.402e-111400Zm.16049.2.A1_atCF042888--3e-4At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.402e-111400Zm.16049.2.A1_a_atCF04288840S ribosomal protein S28-3e-4At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.352e-92337Zm.14007.1.A1_s_atCA83157840S ribosomal protein S28-3e-7At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.402e-92337Zm.14007.2.A1_atCF017494--3e-7At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.352e-92337Zm.14007.1.A1_atCA831578--3e-7At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.228e-548Arabidopsis thalianaAt5g0385083169240S ribosomal protein S28 (RPS28B)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, ribosome, cell wall, plasma membrane;MOAPF---C.G.S.X.
0.238e-1891Glycine maxGmaAffx.60550.2.S1_atCA783622--1e-12At3g1009040S ribosomal protein S28 (RPS28A)C.G.S.X.
0.329e-74276Hordeum vulgareContig3403_s_atContig3403--2e-2At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
0.306e-81301Oryza sativaOs10g0411700AK058209.1-Ribosomal protein S285e-3At3g1009040S ribosomal protein S28 (RPS28A)C.G.S.X.
0.138e-1581Populus trichocarpaPtp.4340.1.S1_atCX167767hypothetical protein-3e-20At3g1009040S ribosomal protein S28 (RPS28A)C.G.S.X.
0.372e-107389Triticum aestivumTa.26780.1.A1_atCD491141--7e-8At3g1009040S ribosomal protein S28 (RPS28A)C.G.S.X.
0.282e-30131Vitis vinifera1610667_s_atCD799449hypothetical protein LOC100241860-4e-9At5g0385040S ribosomal protein S28 (RPS28B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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