Gene omics information

Query gene ID Zm.15919.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.15919.1.S1_atAY105419.1--2e+0At5g25290F-box family proteinS.X.H.G.
0.5065.7Zm.9089.1.A1_atBM332138--5e+0At5g39340AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3)S.X.H.G.
0.5065.7Zm.17709.1.S1_atCK369588--3e+0At5g62660F-box family proteinS.X.H.G.
0.2115.5Zm.2197.3.A1_a_atCF650537cystathionine gamma-synthase1 /// hypothetical protein LOC100191523-1e-5At3g01120MTO1 (METHIONINE OVERACCUMULATION 1)S.X.H.G.
0.1912.8Zm.4189.1.S1_atBM378985Pyruvate Pi dikinase regulatory protein-5e-2At3g01200AtRP2 (PPDK regulatory protein 2)S.X.H.G.
0.062.3Zm.19019.1.A1_atBM080703hypothetical protein LOC100276837-2e+0At5g54850unknown proteinS.X.H.G.
0.020.7Zm.7058.3.S1_x_atAY103767.1ypt homolog2-4e-76At5g47200ATRAB1AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.999.8GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
29.099.8GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
27.299.7GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
27.099.7GSM290556CCR mutant M2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
16.699.1GSM258190B37 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
16.499.0GSM258172B37 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
16.499.0GSM258181B37 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
16.399.0GSM258174B84 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
15.198.9GSM258192B84 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
11.798.6GSM258183B84 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.630694Zm.7128.1.A1_a_atBM333224hypothetical protein LOC100276381-2e+0At5g25290F-box family proteinC.G.S.X.
0.304e-43174Zm.7128.2.A1_atCO526884hypothetical protein LOC100276381-5e+0At5g44100ckl7 (Casein Kinase I-like 7)C.G.S.X.
0.026e-238Zm.469.1.A1_atAF178952.1voltage-dependent anion channel protein 2-2e-4At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)C.G.S.X.
0.036e-238Zm.18816.1.A1_atCO527305indole-3-acetate beta-glucosyltransferase-1e+0At4g33730pathogenesis-related protein, putativeC.G.S.X.
0.029e-134Zm.9098.1.A1_a_atBM336161Hypothetical protein LOC100192894-6e-6At4g31550WRKY11C.G.S.X.
0.029e-134Zm.6201.1.A1_atBE643575--1e-1At3g50690leucine-rich repeat family proteinC.G.S.X.
0.019e-134Zm.5646.1.A1_a_atBM347849hypothetical protein LOC100191650-2e-25At1g04760ATVAMP726C.G.S.X.
0.029e-134Zm.17956.1.A1_atCF637428--2e+0At3g20570plastocyanin-like domain-containing proteinC.G.S.X.
0.029e-134Zm.12134.3.A1_a_atAI737095waxy1-2e+0At4g08691unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt5g25290832601F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.062e-448Glycine maxGma.13283.1.S1_atCD400326--3e-2At3g23760-C.G.S.X.
0.411e-111402Hordeum vulgareContig9438_s_atContig9438--3e-5At3g23760-C.G.S.X.
0.423e-127456Oryza sativaOs07g0189700AK099833.1-Conserved hypothetical protein7e-3At3g23760-C.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.217733.1.S1_atpmrna33114hypothetical protein-7e-1At2g0125060S ribosomal protein L7 (RPL7B)C.G.S.X.
0.162e-1377Triticum aestivumTaAffx.78988.1.S1_atBJ261721--8e-3At3g23760-C.G.S.X.
0.036e-134Vitis vinifera1612181_atCF518786hypothetical protein LOC100241990-7e-6At4g14100transferase, transferring glycosyl groupsC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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