Gene omics information

Query gene ID Zm.15906.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5571.6Zm.15906.1.A1_atAI622748--6e-6At1g17290AlaAT1 (ALANINE AMINOTRANSFERAS)S.X.H.G.
0.8094.0Zm.10383.3.A1_atAW562601--9e-20At3g05060SAR DNA-binding protein, putativeS.X.H.G.
0.7188.2Zm.3615.1.A1_atAW330686hypothetical protein LOC100191498-3e-9At1g73670ATMPK15S.X.H.G.
0.7188.2Zm.8751.1.A1_atBM348137--1e+0At3g05700-S.X.H.G.
0.6077.8Zm.6968.1.A1_atAI065873apurinic endonuclease-redox protein-2e+0At3g077503' exoribonuclease family domain 1-containing proteinS.X.H.G.
0.5775.1Zm.4805.1.A1_atCD441355heat shock protein 70 kDa-0At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)S.X.H.G.
0.4455.7Zm.18416.1.A1_atCO524449hypothetical protein LOC100193203-3e-1At3g27900unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.598.7GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
10.298.4GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
9.798.3GSM253252ZM_24h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
8.298.0GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
8.098.0GSM258194Oh43 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
7.797.9GSM258176Oh43 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
7.197.7GSM253251ZM_24h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
7.097.7GSM253250ZM_24h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
6.897.6GSM258197Oh43xB73 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
5.997.3GSM258185Oh43 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6501100Zm.7151.1.A1_atBM339369--3e-9At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.245e-97353Zm.4761.1.A1_atAY107464.1--9e-16At1g17290AlaAT1 (ALANINE AMINOTRANSFERAS)C.G.S.X.
0.093e-1581Zm.2321.4.A1_a_atCD978285alanine aminotransferase 2-6e-19At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.093e-1581Zm.2321.4.A1_atCD978285alanine aminotransferase 2-6e-19At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.053e-961Zm.2321.1.A1_atAW330957hypothetical protein LOC100273503-2e-23At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.026e-134Zm.6095.2.A1_atAI855010hypothetical protein LOC100279680-4e-35At1g15690AVP1C.G.S.X.
0.022e+032Zm.8950.1.S1_atCO530781soluble inorganic pyrophosphatase-1e-11At3g53620AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)C.G.S.X.
0.022e+032Zm.8950.1.A1_atAY109015.1--1e-17At2g18230AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)C.G.S.X.
0.022e+032Zm.8331.1.A1_atBM349811--9e-3At1g72430auxin-responsive protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-652Arabidopsis thalianaAt1g17290838301AlaAT1 (ALANINE AMINOTRANSFERAS)Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia---C.G.S.X.
0.048e-652Glycine maxGma.7690.2.S1_s_atBE803165alanine aminotransferase 1-2e-81At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.141e-26119Hordeum vulgareContig9175_atContig9175--2e-26At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.184e-33143Oryza sativaOs07g0617800AK060481.1-Alanine aminotransferase5e-24At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.038e+032Populus trichocarpaPtpAffx.88129.1.A1_atCV280987--7e+0At4g24030unknown proteinC.G.S.X.
0.215e-31135Triticum aestivumTa.29618.1.S1_atCK205792p0552F09.19 protein-7e-29At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)C.G.S.X.
0.032e+032Vitis vinifera1615542_atCF415517hypothetical protein LOC100245973-4e+0At4g26288-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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