Gene omics information

Query gene ID Zm.15790.1.S1_at
Gene name SWIb domain-containing protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6381.1Zm.15790.1.S1_atAY109814.1SWIb domain-containing protein-1e-1At4g26810SWIB complex BAF60b domain-containing proteinS.X.H.G.
0.6785.8Zm.678.1.S1_atAF302187.1sucrose export defective1-4e-15At4g32770VTE1 (VITAMIN E DEFICIENT 1)S.X.H.G.
0.5369.1Zm.12511.1.S1_atAW062063hypothetical protein LOC100276976-5e+0At5g53110-S.X.H.G.
0.5065.7Zm.12936.1.A1_atAY108987.1--7e-1At3g21338unknown proteinS.X.H.G.
0.4048.5Zm.2157.1.A1_a_atCA452419ribosomal protein S11-4e-39At4g3080040S ribosomal protein S11 (RPS11B)S.X.H.G.
0.136.8ZmAffx.51.1.A1_atAI665015Hypothetical protein LOC100217062-1e+1At5g54215-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.197.7GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.897.6GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.797.6GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
6.397.4GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.297.4GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.097.3GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.396.9GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.296.9GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
5.096.7GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.896.6GSM202296B73xMo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-238Zm.16271.2.A1_atAY110109.1Hypothetical protein LOC100193158-2e-28At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)C.G.S.X.
0.025e-238Zm.16271.2.S1_atAY110109.1hypothetical protein LOC100272710-2e-28At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)C.G.S.X.
0.027e-134Zm.4126.1.A1_atAY112344.1small nucleolar ribonucleoprotein complex subunit-1e+0At3g50440MES10 (METHYL ESTERASE 10)C.G.S.X.
0.027e-134Zm.1910.1.A1_atAY106672.1hypothetical protein LOC100194078-3e+0At4g02160unknown proteinC.G.S.X.
0.013e+032Zm.238.1.S1_atCO523309SBP-domain protein 4-4e-6At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)C.G.S.X.
0.013e+032Zm.18376.1.A1_atAI615179hypothetical protein LOC100274438-2e-22At4g02630protein kinase family proteinC.G.S.X.
0.023e+032Zm.13919.1.A1_atAF057523.1hypoxically induced transcript 3-5e+0At5g04210RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.023e+032Zm.13919.1.S1_atAF057523.1hypoxically induced transcript 3-5e+0At5g04210RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.013e+032Zm.1035.1.S1_atU17351.1thiamine biosynthetic enzyme-5e-5At5g54770THI1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-138Arabidopsis thalianaAt4g26810828788SWIB complex BAF60b domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFOM---C.G.S.X.
0.032e+034Glycine maxGmaAffx.31666.1.A1_atBM524416--8e-2At3g21750UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1)C.G.S.X.
0.119e-754Hordeum vulgareContig11253_atContig11253--1e+0At4g34290SWIB complex BAF60b domain-containing proteinC.G.S.X.
0.032e-138Oryza sativaOsAffx.28552.1.S1_at---0C.G.S.X.
0.021e+132Populus trichocarpaPtpAffx.30786.1.A1_atAJ775362hypothetical protein-2e-11At3g17760GAD5 (glutamate decarboxylase 5)C.G.S.X.
0.061e-448Triticum aestivumTa.7194.1.S1_s_atCK153691--3e-2At2g14880SWIB complex BAF60b domain-containing proteinC.G.S.X.
0.031e-136Vitis vinifera1607046_atBQ794452hypothetical protein LOC100265342-4e-10At3g19080SWIB complex BAF60b domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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