Gene omics information

Query gene ID Zm.15758.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.15758.1.S1_atCD446592--2e-17At3g59040pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.4048.5Zm.16185.1.A1_atCK368125--3e-2At1g44830AP2 domain-containing transcription factor TINY, putativeS.X.H.G.
0.3131.6Zm.799.1.S1_atBF728689regulatory protein NPR1-1e+0At2g01500PFS2 (PRETTY FEW SEEDS 2)S.X.H.G.
0.169.4Zm.3715.2.A1_a_atAY103872.1hypothetical protein LOC100273717 /// spliceosome RNA helicase BAT1-9e-152At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingS.X.H.G.
0.169.4Zm.16188.1.A1_atAY108605.1--1e-7At4g38320HHP5 (heptahelical protein 5)S.X.H.G.
0.147.7ZmAffx.46.1.A1_atAI664945hypothetical protein LOC100273468-3e+0At5g62260DNA bindingS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.698.9GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.696.4GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.696.4GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.596.3GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.496.2GSM253263ZM_4d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.296.0GSM253252ZM_24h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.195.9GSM253251ZM_24h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.195.9GSM253250ZM_24h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.095.8GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7902740Zm.15758.1.A1_atAY110766.1--2e-17At3g59040pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.023e-240Zm.9058.1.A1_atBM266530--5e+0At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.012e+034Zm.8172.1.A1_atBM073149hypothetical protein LOC100279017-9e-1At3g50480HR4 (HOMOLOG OF RPW8 4)C.G.S.X.
0.012e+034Zm.6667.1.A1_atAW067052--2e-16At1g02890AAA-type ATPase family proteinC.G.S.X.
0.012e+034Zm.6667.1.S1_atBM348822--2e-16At1g02890AAA-type ATPase family proteinC.G.S.X.
0.012e+034Zm.6558.1.S1_atAF073329.1eukaryotic initiation factor3-1e-10At4g11420EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A)C.G.S.X.
0.012e+034Zm.6448.1.A1_atBG842262antigenic determinant of rec-A protein-3e-18At1g55460Kin17 DNA-binding protein-relatedC.G.S.X.
0.022e+034Zm.6246.2.A1_atAI677558--9e-7At2g22080unknown proteinC.G.S.X.
0.012e+034Zm.2169.1.A1_atBM079581--2e+0At3g10250unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-1791Arabidopsis thalianaAt3g59040825073pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBA---C.G.S.X.
0.033e-138Glycine maxGmaAffx.33081.1.S1_s_atBQ453706--3e+0At1g28306-C.G.S.X.
0.202e-37157Hordeum vulgareContig25611_atContig25611--2e-2At1g68870unknown proteinC.G.S.X.
0.6301275Oryza sativaOs08g0191900AK067587.1-TPR-like domain containing protein3e-16At3g59040pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.082e-1895Populus trichocarpaPtpAffx.64772.1.S1_atCK107609hypothetical protein-4e-12At3g59040pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.283e-96353Triticum aestivumTaAffx.38202.1.S1_atBJ245313--1e-5At3g59040pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.011e+034Vitis vinifera1612252_atBQ794324hypothetical protein LOC100248829-3e-11At4g38320HHP5 (heptahelical protein 5)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage