Gene omics information

Query gene ID	Zm.15705.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.15705.1.A1_at	CD440189	-	-	1e-4	At4g38270	GAUT3 (Galacturonosyltransferase 3)	S.X.	H.G.	Please select
0.61	79.5	Zm.13581.1.A1_at	BM379129	-	-	2e-4	At5g65460	kinesin motor protein-related	S.X.	H.G.	Please select
0.50	65.7	ZmAffx.1118.2.A1_at	AW267189	-	-	8e-1	At2g27360	lipase, putative	S.X.	H.G.	Please select
0.50	65.7	Zm.7941.1.A1_at	BM080529	-	-	1e+0	At3g50040	unknown protein	S.X.	H.G.	Please select
0.46	58.4	Zm.5995.2.S1_a_at	AI666102	-	-	2e+0	At4g14385	-	S.X.	H.G.	Please select
0.44	55.7	Zm.218.1.A1_a_at	AB016802.1	ABA stimulation MAP kinase	-	6e-42	At2g43790	ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
32.6	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.5	99.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.4	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.2	99.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.5	99.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.4	99.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.9	99.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.6	99.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.2	99.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.98	0	1927	Zm.15705.1.S1_at	CD441079	transferase, transferring glycosyl groups	-	1e-4	At4g38270	GAUT3 (Galacturonosyltransferase 3)	C.G.	S.X.	Please select
0.03	1e-6	54	Zm.13469.1.S1_at	AY109041.1	hypothetical protein LOC100191781	-	2e-30	At3g61130	GAUT1 (GALACTURONOSYLTRANSFERASE 1)	C.G.	S.X.	Please select
0.04	1e-3	44	Zm.15933.1.A1_at	CA400453	-	-	2e-22	At3g61130	GAUT1 (GALACTURONOSYLTRANSFERASE 1)	C.G.	S.X.	Please select
0.03	4e-3	42	Zm.17090.1.S1_at	AW155707	transferase, transferring glycosyl groups	-	2e-4	At2g20810	GAUT10 (GALACTURONOSYLTRANSFERASE 10)	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.506.1.A1_at	AF061838.1	6-phosphogluconate dehydrogenase2	-	5e-55	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.17221.1.A1_at	CF626092	-	-	5e+0	At1g72600	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.17221.1.S1_at	AY105505.1	-	-	5e+0	At1g72600	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.10058.1.A1_at	BM378675	hypothetical protein LOC100192027	-	2e+0	At3g27160	GHS1 (GLUCOSE HYPERSENSITIVE 1)	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.4027.2.A1_at	CO527250	hypothetical protein LOC100272558	-	6e-1	At1g49600	ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e-4	48	Arabidopsis thaliana	At4g38270	829984	GAUT3 (Galacturonosyltransferase 3)	Encodes a protein with putative galacturonosyltransferase activity.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.13	2e-7	57	Glycine max	GmaAffx.9545.2.S1_at	BI784753	-	-	4e-31	At5g47780	GAUT4 (Galacturonosyltransferase 4)	C.G.	S.X.	Please select
0.49	7e-122	436	Hordeum vulgare	Contig12834_at	Contig12834	-	-	6e-13	At5g47780	GAUT4 (Galacturonosyltransferase 4)	C.G.	S.X.	Please select
0.22	3e-90	333	Oryza sativa	Os08g0327100	AK073839.1	-	Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)	1e-15	At5g47780	GAUT4 (Galacturonosyltransferase 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	5e-2	40	Populus trichocarpa	PtpAffx.61842.1.A1_at	CK091185	-	-	7e-46	At3g02350	GAUT9 (Galacturonosyltransferase 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.28	5e-106	385	Triticum aestivum	Ta.7145.1.S1_at	CK194366	-	-	2e-8	At5g47780	GAUT4 (Galacturonosyltransferase 4)	C.G.	S.X.	Please select
0.20	4e-14	77	Vitis vinifera	1613790_at	BQ799915	hypothetical protein LOC100258406	-	4e-88	At5g47780	GAUT4 (Galacturonosyltransferase 4)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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