CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.15628.1.S1_at

Gene name hypothetical protein LOC100193098

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.76 91.1 Zm.15628.1.S1_at CF628706 hypothetical protein LOC100193098 - 2e-10 At3g54320 WRI1 (WRINKLED 1) S.X. H.G.
0.63 81.1 ZmAffx.57.1.S1_at AI665066 - - 1e+1 At3g43083 LCR33 (Low-molecular-weight cysteine-rich 33) S.X. H.G.
0.57 75.1 Zm.17757.1.S1_at CK371299 polygalacturonase inhibitor 1 - 1e+0 At3g44100 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein S.X. H.G.
0.53 69.1 Zm.2267.1.S1_a_at AY105804.1 hypothetical protein LOC100216854 - 7e-7 At1g79860 ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12) S.X. H.G.
0.50 65.7 Zm.17694.1.S1_at CK370322 - - 5e+0 At3g22230 60S ribosomal protein L27 (RPL27B) S.X. H.G.
0.50 65.7 Zm.18399.1.A1_at CO534452 - - 2e+0 At5g15560 unknown protein S.X. H.G.
0.48 61.3 Zm.10571.1.A1_at BQ538363 hypothetical protein LOC100216835 - 3e-1 At3g60360 EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14) S.X. H.G.
0.43 52.8 ZmAffx.788.1.A1_at AI759113 - - 8e-1 At4g33925 unknown protein S.X. H.G.
0.38 44.2 Zm.9897.1.A1_at BM331892 hypothetical protein LOC100279693 - 6e-3 At2g34850 MEE25 (maternal effect embryo arrest 25) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.8 99.7 GSM202319 Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
26.5 99.7 GSM202313 B73xMo17 19 day after pollination embryo tissue, biological replicate 1 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
26.2 99.7 GSM202322 B73x Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
23.0 99.5 GSM202318 B73xMo17 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
23.0 99.5 GSM202324 Mo17xB73 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
22.9 99.5 GSM202320 B73 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
21.5 99.4 GSM202310 B73 19 day after pollination embryo tissue, biological replicate 1 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
20.8 99.4 GSM202315 B73 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
18.6 99.2 GSM202314 Mo17 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
17.1 99.1 GSM202316 Mo17xB73 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.41 2e-101 369 Zm.8972.1.S1_at CD435957 hypothetical protein LOC100217237 - 7e-17 At3g54320 WRI1 (WRINKLED 1) C.G. S.X.
0.01 3e-1 36 Zm.3550.1.A1_at CF624216 sucrose synthase1 - 8e-12 At3g43190 SUS4 C.G. S.X.
0.01 3e-1 36 Zm.13746.1.S1_at CD998898 pre-mRNA-splicing factor cwc24 - 4e-11 At5g11340 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.01 1e+0 34 Zm.18390.1.A1_at CA399205 hypothetical protein LOC100274421 - 3e-9 At3g10980 unknown protein C.G. S.X.
0.01 1e+0 34 Zm.18307.1.S1_at CO517671 - - 8e-1 At5g19950 unknown protein C.G. S.X.
0.02 1e+0 34 Zm.16258.1.A1_at CF245017 hypothetical protein LOC100192479 - 8e-2 At5g14620 DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2) C.G. S.X.
0.01 1e+0 34 Zm.15610.1.A1_at CD435304 hypothetical protein LOC100274799 - 8e+0 At4g02655 unknown protein C.G. S.X.
0.01 5e+0 32 Zm.9529.1.A1_at CA399003 hypothetical protein LOC100191488 - 3e-35 At1g20380 prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative C.G. S.X.
0.01 5e+0 32 Zm.9438.1.A1_at BM268881 - - 2e-7 At4g31770 calcineurin-like phosphoesterase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-10 67 Arabidopsis thaliana At3g54320 824599 WRI1 (WRINKLED 1) WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. - - - C.G. S.X.
0.04 1e-3 46 Glycine max GmaAffx.29044.1.S1_at BU551115 - - 1e-44 At4g37750 ANT (AINTEGUMENTA) C.G. S.X.
0.02 9e-2 38 Hordeum vulgare HVSMEh0100N12f_at HVSMEh0100N12f - - 1e+1 At3g24315 AtSec20 C.G. S.X.
0.12 5e-31 137 Oryza sativa Os11g0129700 AK112088.1 - Pathogenesis-related transcriptional factor andERF domain containing protein 1e-6 At3g54320 WRI1 (WRINKLED 1) C.G. S.X.
0.05 1e-3 46 Populus trichocarpa PtpAffx.207798.1.S1_at pmrna15500 AP2 domain-containing transcription factor - 4e-77 At5g17430 BBM (BABY BOOM) C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.58498.1.S1_at CA619108 - - 5e-9 At5g20830 SUS1 (SUCROSE SYNTHASE 1) C.G. S.X.
0.01 3e+0 32 Vitis vinifera 1622426_at CF205289.1 - - 9e-5 At2g39210 nodulin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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