Gene omics information

Query gene ID Zm.15542.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.15542.1.S1_atCD219383--2e-2At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)S.X.H.G.
0.5571.6Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinS.X.H.G.
0.5571.6Zm.5826.1.A1_atCA402658--9e-1At2g43820UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)S.X.H.G.
0.4455.7Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinS.X.H.G.
0.4352.8Zm.16573.1.A1_atCA398704--2e+0At1g78710unknown proteinS.X.H.G.
0.2928.1Zm.14496.1.A1_atCF014750sesquiterpene cyclase-like-1e+0At5g46710zinc-binding family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.499.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.399.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.599.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.398.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.098.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.898.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.698.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.697.9GSM253271ZM_4.5d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
7.697.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-652Zm.1603.1.S1_atBM895253IAA20 - auxin-responsive Aux/IAA family member-6e-1At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)C.G.S.X.
0.045e-444Zm.3607.1.A1_atAW017627IAA30 - auxin-responsive Aux/IAA family member-1e-14At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
0.053e-238Zm.19101.1.S1_atCF624534hypothetical protein LOC100273242-5e-8At4g28640IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11)C.G.S.X.
0.041e-136ZmAffx.1213.1.A1_atBU051439--2e-1At3g10190calmodulin, putativeC.G.S.X.
0.041e-136ZmAffx.1213.1.S1_atBU051439--2e-1At3g10190calmodulin, putativeC.G.S.X.
0.031e-136Zm.3971.1.A1_atAY105137.1--5e-1At5g49280hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.031e-136Zm.3971.1.S1_atAI820113hypothetical protein LOC100275101-5e-1At5g49280hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.021e-136Zm.14358.1.A1_atCA402172hypothetical protein LOC100217181-2e-10At1g72710CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)C.G.S.X.
0.031e-136Zm.10389.1.A1_atAY095207.1glycine-rich protein GRP5-4e-1At5g17650glycine/proline-rich proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-240Arabidopsis thalianaAt4g29080829029PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)phytochrome-associated protein 2 (PAP2)---C.G.S.X.
0.044e-136Glycine maxGmaAffx.80917.1.A1_atBE583981--4e+0Atmg01280-C.G.S.X.
0.143e-238Hordeum vulgareHVSMEb0011L05r2_x_atHVSMEb0011L05r2--2e+0At3g05746unknown proteinC.G.S.X.
0.111e-1067Oryza sativaOs02g0805100AK073365.1-AUX/IAA protein family protein5e-1At5g38980unknown proteinC.G.S.X.
0.069e-238Populus trichocarpaPtpAffx.48196.1.S1_s_atBU895985hypothetical protein-5e-1At5g23535KOW domain-containing proteinC.G.S.X.
0.132e-550Triticum aestivumTa.16912.1.S1_atCA614936--4e-5At3g04730IAA16C.G.S.X.
0.051e+032Vitis vinifera1615985_atCF516133hypothetical protein LOC100264878-8e-17At4g14560IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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