Gene omics information

Query gene ID	Zm.15510.1.A1_at
Gene name	mitochondrial carrier YMR166C
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.70	87.0	Zm.15510.1.A1_at	CD441066	mitochondrial carrier YMR166C	-	2e-7	At1g74240	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select
0.59	76.1	Zm.1551.1.A1_at	BM339714	peptidyl-prolyl cis-trans isomerase 1	-	6e-3	At2g18040	PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1)	S.X.	H.G.	Please select
0.55	71.6	Zm.1227.1.S1_at	CK370465	hypothetical protein LOC100191505	-	6e-1	At3g49250	DMS3 (DEFECTIVE IN MERISTEM SILENCING 3)	S.X.	H.G.	Please select
0.53	69.1	Zm.16994.2.A1_a_at	CF972506	methionine synthase	-	2e-82	At5g17920	ATMS1	S.X.	H.G.	Please select
0.50	65.7	Zm.3747.1.S1_at	BM267525	-	-	3e-1	At2g42930	glycosyl hydrolase family protein 17	S.X.	H.G.	Please select
0.36	41.3	Zm.3159.1.A1_at	BG873749	gamma response I protein	-	2e-2	At3g52120	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein	S.X.	H.G.	Please select
0.32	33.4	Zm.8484.1.A1_at	CD974829	hypothetical protein LOC100279952	-	9e-2	At5g42100	ATBG_PAP	S.X.	H.G.	Please select
0.32	33.4	Zm.5954.1.A1_at	AF464905.1	repressor protein	-	1e-11	At3g12480	NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
31.0	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.6	99.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.2	99.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.6	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.3	99.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7	99.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM205373	Mo17 13 DAP endosperm tissue biological replicate 3	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.7	96.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	3023	Zm.15510.1.S1_at	CD440173	-	-	2e-7	At1g74240	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.4677.1.S1_at	AY105413.1	-	-	9e-1	At3g18260	reticulon family protein (RTNLB9)	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.3255.1.A1_at	BG842791	hypothetical protein LOC100194287	-	1e+0	At1g49720	ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.17413.1.A1_at	AY111871.1	-	-	3e-6	At4g39460	SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.14170.1.A1_a_at	BG841910	hypothetical protein LOC100193006	-	5e-7	At1g54580	ACP2 (ACYL CARRIER PROTEIN 2)	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.665.1.S1_at	AF332169.1	alpha expansin1	-	7e-13	At2g37640	EXP3	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.6466.1.A1_at	AF272750.1	kinesin-like protein2	-	2e-5	At1g18370	HIK (HINKEL)	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.4364.1.A1_at	BM349138	hypothetical protein LOC100273301	-	7e+0	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.3368.1.A1_at	AY107360.1	hypothetical protein LOC100272602	-	4e-31	At1g15500	ATNTT2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	2e-7	57	Arabidopsis thaliana	At1g74240	843764	mitochondrial substrate carrier family protein	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	7e-2	40	Glycine max	Gma.17955.1.S1_s_at	BM307749	-	-	3e-31	At1g72820	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.04	1e-4	48	Hordeum vulgare	Contig17399_at	Contig17399	-	-	3e-1	At3g51210	flavonol 3-sulfotransferase-related	C.G.	S.X.	Please select
0.55	0	837	Oryza sativa	Os03g0213800	AK103114.1	-	Mitochondrial substrate carrier family protein	2e-13	At1g74240	mitochondrial substrate carrier family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.21	8e-11	69	Populus trichocarpa	PtpAffx.210488.1.S1_at	pmrna20578	hypothetical protein	-	2e-25	At1g74240	mitochondrial substrate carrier family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	3e-80	299	Triticum aestivum	Ta.7179.2.S1_at	BJ244535	-	-	1e-3	At1g74240	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Vitis vinifera	1611243_at	CF206227.1	-	-	3e-14	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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