Gene omics information

Query gene ID Zm.1546.3.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.2Zm.1546.3.A1_atCK369824--1e-6At1g15270-S.X.H.G.
0.1710.6Zm.15410.1.A1_atCD441055--5e-1At4g14050pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.072.9Zm.12226.1.A1_atAY104247.1hypothetical protein LOC100273306-8e-7At3g48750CDC2 (CELL DIVISION CONTROL 2)S.X.H.G.
0.072.9Zm.7665.1.S1_atAY108375.1--2e-1At3g13782NAP1S.X.H.G.
0.031.1Zm.6080.2.S1_atAI668342--8e+0At5g20100unknown proteinS.X.H.G.
0.020.7Zm.4207.2.A1_atAW324649hypothetical protein LOC100274836-2e+0At1g06120fatty acid desaturase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
73.4100.0GSM258185Oh43 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
56.9100.0GSM258194Oh43 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
44.8100.0GSM258176Oh43 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
18.899.2GSM258188Oh43xB73 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
17.399.1GSM258197Oh43xB73 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.798.7GSM258189Oh43xMo17 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.798.7GSM258198Oh43xMo17 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
12.598.7GSM258179Oh43xB73 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
10.498.4GSM258180Oh43xMo17 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
0.671.1GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.960920Zm.1546.3.A1_x_atCK369824--1e-6At1g15270-C.G.S.X.
0.810634Zm.1546.2.S1_a_atCB411210hypothetical protein LOC100278775-3e-4At1g15270-C.G.S.X.
0.810634Zm.1546.2.S1_x_atCB411210hypothetical protein LOC100278775-3e-4At1g15270-C.G.S.X.
0.255e-81299Zm.15431.1.S1_atCO526051hypothetical protein LOC100276766-1e-3At1g80780CCR4-NOT transcription complex protein, putativeC.G.S.X.
0.027e-340Zm.6949.1.S1_atCF635740--8e-16At4g31480coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeC.G.S.X.
0.033e-238Zm.7089.1.A1_atBM079067hypothetical protein LOC100217060-1e-1At1g15270-C.G.S.X.
0.034e-134Zm.16996.1.S1_atCF972572--3e-1At3g24450copper-binding family proteinC.G.S.X.
0.022e+032Zm.6432.1.A1_a_atBQ538326hypothetical protein LOC100191156-7e-10At5g64200ATSC35C.G.S.X.
0.022e+032Zm.6432.1.A1_atBQ538326hypothetical protein LOC100191156-7e-10At5g64200ATSC35C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-654Arabidopsis thalianaAt1g15270838094-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MFPO---C.G.S.X.
0.172e-550Glycine maxGma.10800.2.S1_atCD407337--3e-20At1g15270-C.G.S.X.
0.372e-37155Hordeum vulgareContig1752_s_atContig1752--3e-7At1g15270-C.G.S.X.
0.444e-63242Oryza sativaOs.12237.2.S1_a_at---0C.G.S.X.
0.184e-756Populus trichocarpaPtp.2263.1.S1_s_atCV272257hypothetical protein-2e-27At1g15270-C.G.S.X.
0.382e-76286Triticum aestivumTa.17131.1.S1_atCA618076--1e-6At1g15270-C.G.S.X.
0.236e-24109Vitis vinifera1620076_s_atCA809762hypothetical protein LOC100254960-6e-15At1g15270-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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