CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.15418.1.A1_at

Gene name Hypothetical protein LOC100191383

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 79.5 Zm.15418.1.A1_at AY109016.1 Hypothetical protein LOC100191383 - 1e+1 At5g43570 serine-type endopeptidase inhibitor S.X. H.G.
0.54 69.8 Zm.17983.1.A1_at BG840853 hypothetical protein LOC100276768 - 1e+0 At2g40910 F-box protein-related S.X. H.G.
0.48 61.3 Zm.5789.10.A1_x_at AI737302 hypothetical protein LOC100192516 - 6e-14 At1g43170 ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1) S.X. H.G.
0.46 58.4 Zm.3613.1.A1_at BG841007 hypothetical protein LOC100273532 - 4e-24 At5g10540 peptidase M3 family protein / thimet oligopeptidase family protein S.X. H.G.
0.42 51.3 Zm.1481.1.A1_at BG841913 hypothetical protein LOC100279302 - 1e-1 At5g16400 ATF2 S.X. H.G.
0.42 51.3 Zm.4467.1.S1_a_at AW054142 hypothetical protein LOC100193777 - 1e-5 At1g36280 adenylosuccinate lyase, putative / adenylosuccinase, putative S.X. H.G.
0.40 48.5 Zm.564.1.S1_a_at AF244704.1 glutathione S-transferase GST 39 - 3e-2 At2g36640 ATECP63 (EMBRYONIC CELL PROTEIN 63) S.X. H.G.
0.36 41.3 Zm.6131.1.S1_at AY105213.1 hypothetical protein LOC100191528 - 7e-1 At1g74560 NRP1 (NAP1-RELATED PROTEIN 1) S.X. H.G.
0.35 38.9 Zm.2617.1.A1_at AI964629 - - 9e+0 At4g34190 SEP1 (STRESS ENHANCED PROTEIN 1) S.X. H.G.
0.32 33.4 Zm.7826.1.S1_a_at CO532898 hypothetical protein LOC100279851 /// HVA22-like protein a - 1e-1 At4g38160 pde191 (pigment defective 191) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.2 99.6 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.9 99.5 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.9 99.4 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.5 99.3 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7 99.1 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.7 99.1 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3 99.0 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8 98.8 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3 98.7 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1 96.8 GSM202299 Mo17xB73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.90 0 876 Zm.15418.1.S1_at AY109016.1 Hypothetical protein LOC100191383 - 4e+0 At3g09900 ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E) C.G. S.X.
0.02 1e-1 36 Zm.17576.1.S1_at CO521961 protein transporter - 1e+0 At2g38410 VHS domain-containing protein / GAT domain-containing protein C.G. S.X.
0.02 4e-1 34 Zm.5473.1.A1_at AI622094 hypothetical protein LOC100192933 - 3e-6 At5g54130 - C.G. S.X.
0.02 2e+0 32 Zm.5851.1.A1_at BM337140 hypothetical protein LOC100272940 - 1e-2 At4g38630 RPN10 (REGULATORY PARTICLE NON-ATPASE 10) C.G. S.X.
0.01 2e+0 32 Zm.4159.1.A1_at CF007216 - - 3e-16 At1g15130 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.01 2e+0 32 Zm.4159.1.S1_at BM268557 - - 3e-16 At1g15130 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 2e+0 32 Zm.2601.1.S1_at U45856.1 cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 /// glyceraldehyde-3-phosphate dehydrogenase - 3e-139 At3g04120 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) C.G. S.X.
0.01 6e+0 30 Zm.8992.1.S1_at AY103691.1 glyceraldehyde-3-phosphate dehydrogenase, cytosolic - 5e-58 At1g79530 GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1) C.G. S.X.
0.01 6e+0 30 Zm.739.1.S1_at AY105808.1 NAC domain-containing protein 78 - 6e-2 At1g68330 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+1 30 Arabidopsis thaliana At5g43570 834377 serine-type endopeptidase inhibitor Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. - - - C.G. S.X.
0.04 4e-4 46 Glycine max GmaAffx.12258.3.S1_at BU550147 - - 2e+0 At5g59360 unknown protein C.G. S.X.
0.16 3e-30 131 Hordeum vulgare Contig17589_at Contig17589 - - 7e-15 At1g18030 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.06 2e-9 63 Oryza sativa Os09g0314400 AK064380.1 - Protein phosphatase 2C-like domain containingprotein 6e-11 At1g18030 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.06 3e-1 36 Populus trichocarpa Ptp.7674.1.S1_at DN498677 hypothetical protein - 5e-31 At1g18030 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.30841.1.S1_at CA621643 - - 8e+0 At4g21160 ZAC C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1607793_at CF515792 hypothetical protein LOC100263187 - 9e-11 At5g02120 OHP (ONE HELIX PROTEIN) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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