CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.15248.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.8 Zm.15248.1.A1_at BM074646 - - 1e+0 At5g52420 unknown protein S.X. H.G.
0.57 75.1 Zm.5515.1.A1_at CF631927 - - 3e+0 At2g01580 unknown protein S.X. H.G.
0.40 48.5 Zm.14055.1.A1_at AY107585.1 - - 6e+0 At5g59340 WOX2 (WUSCHEL RELATED HOMEOBOX 2) S.X. H.G.
0.27 24.6 Zm.17527.1.A1_at CO534103 hypothetical protein LOC100272457 - 2e+1 At5g51520 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.21 15.5 Zm.18544.1.A1_at CK826617 - - 1e-1 At4g24900 unknown protein S.X. H.G.
0.16 9.4 Zm.17751.1.S1_at CK371154 - - 1e+0 At1g14210 ribonuclease T2 family protein S.X. H.G.
0.06 2.3 Zm.18469.1.S1_at BM378527 oxidoreductase - 2e-7 At4g13250 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.9 98.3 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8 98.3 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.7 98.3 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3 98.2 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8 98.1 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5 98.1 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0 98.0 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4 97.5 GSM253251 ZM_24h_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
5.9 97.3 GSM323170 Zm_SG200Dpep1_24hpi_I GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
5.7 97.2 GSM253246 ZM_12h_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 34 Zm.3080.1.A1_at BM382308 IAA13 - auxin-responsive Aux/IAA family member - 3e-15 At3g23050 IAA7 (INDOLE-3-ACETIC ACID 7) C.G. S.X.
0.03 5e-1 34 Zm.1663.1.A1_at AW574480 VQ motif family protein - 3e+0 At3g04600 tRNA synthetase class I (W and Y) family protein C.G. S.X.
0.03 5e-1 34 Zm.10725.2.S1_a_at BQ539238 - - 5e+0 At5g37290 armadillo/beta-catenin repeat family protein C.G. S.X.
0.03 2e+0 32 ZmAffx.760.1.A1_at AI734521 - - 1e+1 At5g42591 unknown protein C.G. S.X.
0.03 2e+0 32 Zm.9236.1.A1_at BM339258 - - 8e-2 At3g01860 unknown protein C.G. S.X.
0.02 2e+0 32 Zm.9418.1.S1_at AF493799.1 DREB-like protein - 4e-2 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) C.G. S.X.
0.02 2e+0 32 Zm.878.1.S1_x_at AI855310 60S ribosomal protein L35 - 6e-3 At2g39390 60S ribosomal protein L35 (RPL35B) C.G. S.X.
0.02 2e+0 32 Zm.878.1.S1_at AI855310 60S ribosomal protein L35 - 6e-3 At2g39390 60S ribosomal protein L35 (RPL35B) C.G. S.X.
0.02 2e+0 32 Zm.8477.1.S1_at CD991129 VAMP protein SEC22 - 3e+0 At3g12090 TET6 (TETRASPANIN6) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At5g52420 835318 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;P - - - C.G. S.X.
0.06 2e+0 34 Glycine max GmaAffx.61034.2.S1_at BU964606 - - 9e-1 At1g48170 unknown protein C.G. S.X.
0.24 9e-34 143 Hordeum vulgare Contig11985_at Contig11985 - - 3e-2 At5g18310 unknown protein C.G. S.X.
0.26 7e-13 75 Oryza sativa Os02g0148000 AK120401.1 - Zinc finger protein 1e+0 At4g27810 unknown protein C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.93078.1.S1_at BU836206 - - 1e-1 At5g38060 unknown protein C.G. S.X.
0.36 3e-26 119 Triticum aestivum Ta.15513.1.S1_at CA485206 - - 3e+0 At4g31700 RPS6 (RIBOSOMAL PROTEIN S6) C.G. S.X.
0.06 1e+0 32 Vitis vinifera 1620697_at CF568836 - - 1e+0 At3g13857 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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