Gene omics information

Query gene ID	Zm.15155.1.A1_at
Gene name	hypothetical protein LOC100193626
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	75.1	Zm.15155.1.A1_at	CO526660	hypothetical protein LOC100193626	-	2e+0	At3g27200	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.83	95.6	ZmAffx.208.1.A1_at	AI670216	-	-	6e-1	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	S.X.	H.G.	Please select
0.57	75.1	Zm.19049.1.A1_at	BG267149	hypothetical protein LOC100274230	-	4e-5	At4g31550	WRKY11	S.X.	H.G.	Please select
0.44	55.7	Zm.14293.1.S1_at	AY107455.1	hypothetical protein LOC100191275	-	9e+0	At5g06710	HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)	S.X.	H.G.	Please select
0.40	48.5	Zm.12844.2.A1_a_at	CF623983	hypothetical protein LOC100194377	-	4e-10	At5g16540	ZFN3 (ZINC FINGER NUCLEASE 3)	S.X.	H.G.	Please select
0.40	48.5	Zm.5985.3.S1_at	CF041948	-	-	4e-28	At4g16340	SPK1 (SPIKE1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.1	99.4	GSM253274	ZM_8d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
21.7	99.4	GSM253276	ZM_8d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
15.2	98.9	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
11.2	98.5	GSM253275	ZM_8d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
11.1	98.5	GSM253264	ZM_4d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
10.0	98.4	GSM253259	ZM_2d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
9.5	98.3	GSM253256	ZM_2d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
7.8	97.9	GSM253265	ZM_4d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
7.8	97.9	GSM253261	ZM_2d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
7.6	97.9	GSM253263	ZM_4d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-1	34	Zm.9953.1.S1_at	BM349903	-	-	4e+0	At5g55507	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.9929.1.A1_at	BM332583	-	-	1e+0	At5g28420	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	Zm.14176.1.A1_at	CO532657	hypothetical protein LOC100192074	-	4e-8	At5g26210	AL4 (ALFIN-LIKE 4)	C.G.	S.X.	Please select
0.03	8e-1	34	Zm.11697.1.A1_at	CF272745	-	-	1e+0	At4g04620	ATG8B (autophagy 8b)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9987.1.A1_at	BM335812	-	-	9e-2	At5g12190	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.901.1.A1_at	AY109251.1	-	-	1e+0	At2g36026	-	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.901.1.S1_at	AY109251.1	-	-	1e+0	At2g36026	-	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.7867.2.S1_a_at	BM080222	hypothetical protein LOC100192493	-	1e+0	At2g45650	AGL6 (AGAMOUS-LIKE 6)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.4471.2.S1_at	CA401385	Pyruvate, orthophosphate dikinase1	-	5e-25	At4g15530	PPDK (pyruvate orthophosphate dikinase)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At3g27200	822339	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-1	36	Glycine max	GmaAffx.43275.2.S1_at	AW830258	-	-	3e+0	At3g07860	unknown protein	C.G.	S.X.	Please select
0.26	2e-45	182	Hordeum vulgare	Contig5994_s_at	Contig5994	-	-	3e+0	At5g56060	ATP binding / nucleotide binding / phenylalanine-tRNA ligase	C.G.	S.X.	Please select
0.21	2e-54	214	Oryza sativa	Os04g0107600	AK058573.1	-	Arginine decarboxylase (EC 4.1.1.19) (ARGDC) (ADC)	1e+0	At5g08139	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e-1	38	Populus trichocarpa	PtpAffx.90441.1.S1_at	CK106859	-	-	1e+0	At4g06634	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	9e-18	91	Triticum aestivum	Ta.4072.1.A1_at	BJ264536	-	-	1e+0	At2g42140	VQ motif-containing protein	C.G.	S.X.	Please select
0.03	3e-2	38	Vitis vinifera	1611479_at	CD799903	heterogeneous nuclear ribonucleoprotein-like	-	2e-1	At3g27200	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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