CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.1503.2.S1_at

Gene name hypothetical protein LOC100278602

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 79.5 Zm.1503.2.S1_at BG840165 hypothetical protein LOC100278602 - 6e-1 At2g45530 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.82 94.6 Zm.3864.1.A1_at AY106452.1 calmodulin2 - 8e-80 At3g56800 CAM3 (CALMODULIN 3) S.X. H.G.
0.81 94.3 Zm.17771.1.S1_at CF623570 - - 5e+0 At5g27860 unknown protein S.X. H.G.
0.73 89.9 Zm.11126.1.S1_at AA979835 - - 2e+0 At5g07880 SNAP29 S.X. H.G.
0.72 88.6 Zm.2376.7.A1_at BM079913 - - 2e-2 At5g60370 unknown protein S.X. H.G.
0.70 87.0 Zm.7720.1.S1_at CK347322 - - 2e-10 At2g21630 transport protein, putative S.X. H.G.
0.67 85.8 Zm.14497.12.A1_at CA404826 hypothetical protein LOC100192792 - 6e-22 At1g07790 HTB1 S.X. H.G.
0.67 85.8 Zm.17158.3.A1_at BM078932 - - 4e+0 At3g08920 rhodanese-like domain-containing protein S.X. H.G.
0.64 81.7 Zm.15626.1.S1_at CA404507 - - 1e-8 At5g66510 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3) S.X. H.G.
0.62 79.8 Zm.12573.1.A1_a_at BI233467 hypothetical protein LOC100192765 /// hypothetical protein LOC100276406 - 2e+0 At3g20450 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.7 96.5 GSM202320 B73 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.4 96.2 GSM202322 B73x Mo17 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.2 96.0 GSM323172 Zm_SG200Dpep1_24hpi_III GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.9 95.7 GSM202324 Mo17xB73 19 day after pollination embryo tissue, biological replicate 3 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.9 95.7 GSM202311 Mo17xB73 19 day after pollination embryo tissue, biological replicate 1 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.7 95.4 GSM202315 B73 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.5 95.1 GSM202316 Mo17xB73 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.5 95.1 GSM202313 B73xMo17 19 day after pollination embryo tissue, biological replicate 1 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.5 95.1 GSM202318 B73xMo17 19 day after pollination embryo tissue, biological replicate 2 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.5 95.1 GSM202310 B73 19 day after pollination embryo tissue, biological replicate 1 GSE8179 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 2e-91 335 Zm.4488.1.A1_x_at AI734415 - - 8e-1 At5g54500 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) C.G. S.X.
0.02 3e-1 36 Zm.9826.1.A1_at BM332738 - - 1e+0 At3g28680 prolylcarboxypeptidase-related C.G. S.X.
0.01 3e-1 36 Zm.746.1.A1_at AF141378.1 protein kinase PK4 - 7e-8 At5g01820 ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1) C.G. S.X.
0.01 3e-1 36 Zm.663.1.S1_at AF318075.1 cis-zeatin O-glucosyltransferase1 - 7e-1 At5g59580 UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1) C.G. S.X.
0.01 3e-1 36 Zm.3972.1.A1_at AI734598 26S protease regulatory subunit S10B - 2e-33 At5g43010 RPT4A C.G. S.X.
0.01 1e+0 34 Zm.7145.1.A1_at BE510364 hypothetical protein LOC100193598 - 2e-5 At5g07180 ERL2 (ERECTA-LIKE 2) C.G. S.X.
0.01 1e+0 34 Zm.5104.1.A1_at AI615082 - - 4e-6 At3g05940 unknown protein C.G. S.X.
0.01 1e+0 34 Zm.3919.1.S1_at BG840867 hypothetical protein LOC100194180 - 7e-16 At3g05280 integral membrane Yip1 family protein C.G. S.X.
0.02 1e+0 34 Zm.3657.1.A1_s_at BG874068 - - 1e+0 At5g42635 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 36 Arabidopsis thaliana At2g45530 819161 zinc finger (C3HC4-type RING finger) family protein F:zinc ion binding;P:unknown;C:unknown;PMOFV - - - C.G. S.X.
0.02 9e-1 36 Glycine max PsAffx.psMC006xG09f_s_at PsAffx.psMC006xG09f - - 1e+1 At4g08280 - C.G. S.X.
0.02 7e-2 38 Hordeum vulgare Contig9370_at Contig9370 - - 2e-1 At1g78410 VQ motif-containing protein C.G. S.X.
0.02 2e-2 42 Oryza sativa Os07g0590000 AK111301.1 - Conserved hypothetical protein 1e-1 At5g04340 ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6) C.G. S.X.
0.03 8e-1 36 Populus trichocarpa PtpAffx.212524.1.S1_s_at pmrna24528 - - 2e-23 At4g27585 band 7 family protein C.G. S.X.
0.26 8e-93 341 Triticum aestivum TaAffx.112759.1.S1_at CA621189 - - 1e+0 At5g01940 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein C.G. S.X.
0.02 5e-2 38 Vitis vinifera 1613423_a_at CB969431 - - 1e-18 At1g65270 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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