Gene omics information

Query gene ID	Zm.14951.3.S1_x_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.40	48.5	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.9942.1.A1_at	CK368883	hypothetical protein LOC100274544	-	8e-2	At5g63740	zinc finger protein-related	S.X.	H.G.	Please select
0.43	52.8	Zm.15703.1.A1_at	CD441403	hypothetical protein LOC100272924	-	8e-1	At2g14247	Expressed protein	S.X.	H.G.	Please select
0.31	31.6	Zm.1196.1.S1_at	BE518673	-	-	3e-8	At5g16230	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	S.X.	H.G.	Please select
0.23	18.6	Zm.8704.1.A1_at	BM334351	hypothetical protein LOC100275569	-	7e-1	At5g07590	WD-40 repeat protein family	S.X.	H.G.	Please select
0.07	2.9	Zm.15298.1.A1_at	BQ538208	-	-	1e+0	At5g63740	zinc finger protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.6	99.9	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
41.9	99.9	GSM375796	Deep-sowing 10d treatment GA3, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
28.8	99.7	GSM375791	Deep-sowing 10d treatment GA3, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
14.2	98.8	GSM385710	Deep-sowing 10d treatment TIBA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
7.2	97.8	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.8	97.2	GSM375795	Deep-sowing 10d treatment Control, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
5.0	96.7	GSM385707	Deep-sowing 10d treatment IAA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
3.9	95.7	GSM258185	Oh43 11-day seedling aerial tissue biological replicate 2	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
3.5	95.1	GSM385708	Deep-sowing 10d treatment IAA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
3.3	94.7	GSM258176	Oh43 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.62	0	741	Zm.162.1.A1_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.62	0	741	Zm.162.1.A1_x_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.61	9e-103	373	Zm.14951.1.S1_x_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.61	9e-103	373	Zm.14951.1.S1_a_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.27	9e-103	373	Zm.14951.1.A1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.61	9e-103	373	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.55	8e-94	343	Zm.14951.2.S1_x_at	BG837389	-	-	9e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.10	1e-27	123	Zm.9926.1.A1_at	CA401778	-	-	7e-1	At4g15790	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.17959.1.A1_at	CK827746	hypothetical protein LOC100276601	-	5e-3	At5g23950	C2 domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-1	36	Arabidopsis thaliana	At5g66370	836769	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-1	38	Glycine max	Gma.7405.1.A1_at	BU547481	-	-	8e-11	At2g38060	PHT4	C.G.	S.X.	Please select
0.03	2e-2	40	Hordeum vulgare	Contig13998_at	Contig13998	-	-	2e+0	At1g36240	60S ribosomal protein L30 (RPL30A)	C.G.	S.X.	Please select
0.03	5e-3	44	Oryza sativa	OsAffx.16046.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e-1	38	Populus trichocarpa	PtpAffx.208494.1.S1_s_at	pmrna16869	hypothetical protein	-	4e-2	At5g61510	NADP-dependent oxidoreductase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.56	1e-106	387	Triticum aestivum	TaAffx.112283.1.S1_at	CA622230	-	-	6e+0	At5g66370	unknown protein	C.G.	S.X.	Please select
0.02	7e-1	34	Vitis vinifera	1609294_at	BQ794042	hypothetical protein LOC100260823	-	5e-9	At1g32160	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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