Gene omics information

Query gene ID	Zm.14951.2.S1_x_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.54	69.8	Zm.14951.2.S1_x_at	BG837389	-	-	9e-3	At2g30370	allergen-related	S.X.	H.G.	Please select
0.43	52.8	Zm.7750.1.S1_at	L10633.1	beta-6 tubulin	-	1e-151	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.43	52.8	Zm.775.1.A1_at	BI992654	-	-	1e+0	At3g08990	yippee family protein	S.X.	H.G.	Please select
0.43	52.8	Zm.7750.2.S1_at	AY103542.1	Beta-6 tubulin	-	3e-155	At5g12250	TUB6 (BETA-6 TUBULIN)	S.X.	H.G.	Please select
0.42	51.3	Zm.3423.1.S1_at	AY110813.1	-	-	3e-3	At4g24040	TRE1 (TREHALASE 1)	S.X.	H.G.	Please select
0.38	44.2	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	S.X.	H.G.	Please select
0.28	28.1	Zm.8704.1.A1_at	BM334351	hypothetical protein LOC100275569	-	7e-1	At5g07590	WD-40 repeat protein family	S.X.	H.G.	Please select
0.27	24.6	Zm.10347.1.S1_s_at	AF012888.1	Tousled-like kinase 1 /// Tousled-like kinase 2	-	3e-52	At5g20930	TSL (TOUSLED)	S.X.	H.G.	Please select
0.08	3.4	Zm.4191.2.S1_a_at	BQ547780	hypothetical protein LOC100280227	-	1e-7	At3g13340	WD-40 repeat family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
50.4	100.0	GSM385710	Deep-sowing 10d treatment TIBA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
38.0	99.9	GSM375796	Deep-sowing 10d treatment GA3, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
28.1	99.7	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
27.3	99.7	GSM385708	Deep-sowing 10d treatment IAA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
18.8	99.2	GSM375791	Deep-sowing 10d treatment GA3, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
18.1	99.2	GSM385707	Deep-sowing 10d treatment IAA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
10.9	98.5	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
9.7	98.3	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
9.3	98.2	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.0	97.3	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.67	3e-136	484	Zm.14951.1.S1_x_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.67	3e-136	484	Zm.14951.1.S1_a_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.32	3e-136	484	Zm.14951.1.A1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.67	3e-136	484	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.54	7e-94	343	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.47	1e-73	276	Zm.162.1.A1_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.47	1e-73	276	Zm.162.1.A1_x_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.06	3e-22	105	Zm.3223.2.A1_at	BM276845	40S ribosomal protein S13 /// ribosomal protein13	-	2e-9	At4g00100	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.12777.1.A1_at	CA402980	-	-	3e+0	At3g06780	glycine-rich protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	9e-3	42	Arabidopsis thaliana	At2g30370	817587	allergen-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e-3	44	Glycine max	GmaAffx.46538.1.S1_s_at	BM732780	ribosomal protein S13	-	2e-10	At4g00100	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)	C.G.	S.X.	Please select
0.03	2e-2	40	Hordeum vulgare	Contig2462_at	Contig2462	-	-	3e-23	At3g60770	40S ribosomal protein S13 (RPS13A)	C.G.	S.X.	Please select
0.05	2e-2	42	Oryza sativa	Os04g0418800	AK064039.1	-	Pistil-specific extensin-like protein familyprotein	7e-1	At1g75830	LCR67	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	2e-1	38	Populus trichocarpa	PtpAffx.224088.1.S1_s_at	pmrna42325	hypothetical protein	-	3e-1	At1g10747	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	2e-71	270	Triticum aestivum	TaAffx.112283.1.S1_at	CA622230	-	-	6e+0	At5g66370	unknown protein	C.G.	S.X.	Please select
0.03	6e-1	34	Vitis vinifera	1621151_at	CB971601	hypothetical protein LOC100260643	-	3e-1	At3g07260	forkhead-associated domain-containing protein / FHA domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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