Gene omics information

Query gene ID	Zm.14951.1.S1_x_at
Gene name	cell wall protein (put.); putative
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.14951.1.S1_x_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	S.X.	H.G.	Please select
0.46	58.4	Zm.5326.1.S1_at	AI621902	hypothetical protein LOC100193243	-	2e-11	At3g22190	IQD5 (IQ-domain 5)	S.X.	H.G.	Please select
0.42	51.3	Zm.5960.1.A1_at	AI665953	hypothetical protein LOC100277799	-	1e+1	At5g65158	-	S.X.	H.G.	Please select
0.38	44.2	Zm.17581.1.S1_at	CK371654	hypothetical protein LOC100216838	-	2e+0	At1g68540	oxidoreductase family protein	S.X.	H.G.	Please select
0.38	44.2	Zm.2761.1.S1_at	AW330892	hypothetical protein LOC100279307	-	3e-3	At1g43690	ubiquitin interaction motif-containing protein	S.X.	H.G.	Please select
0.38	44.2	Zm.8551.1.A1_at	BM333970	-	-	2e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	S.X.	H.G.	Please select
0.38	44.2	Zm.3289.1.A1_at	AI979535	-	-	2e+0	At3g16240	DELTA-TIP	S.X.	H.G.	Please select
0.36	41.3	Zm.961.1.A1_at	CA400684	LAP4 protein	-	2e+0	At2g02370	-	S.X.	H.G.	Please select
0.36	41.3	Zm.15995.2.A1_at	AW289130	peptidyl-prolyl cis-trans isomerase CYP19-4	-	1e-18	At5g58710	ROC7	S.X.	H.G.	Please select
0.36	41.3	Zm.13310.1.S1_at	CA827497	-	-	2e-5	At1g65660	SMP1 (SWELLMAP 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.8	99.7	GSM385710	Deep-sowing 10d treatment TIBA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
24.3	99.6	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
22.7	99.5	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
21.8	99.4	GSM375791	Deep-sowing 10d treatment GA3, biological rep1	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
21.2	99.4	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
17.0	99.1	GSM375796	Deep-sowing 10d treatment GA3, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
15.0	98.9	GSM385708	Deep-sowing 10d treatment IAA, biological rep2	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
14.9	98.9	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
10.2	98.4	GSM385707	Deep-sowing 10d treatment IAA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
8.0	98.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1316	Zm.14951.1.S1_a_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
1.00	0	1316	Zm.14951.1.A1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
1.00	0	1316	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.49	0	716	Zm.162.1.A1_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.49	0	716	Zm.162.1.A1_x_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.67	2e-136	484	Zm.14951.2.S1_x_at	BG837389	-	-	9e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.61	5e-103	373	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.01	1e-1	36	Zm.2059.1.S1_at	AI746127	-	-	1e-86	At3g58610	ketol-acid reductoisomerase	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.9546.1.A1_at	AY105569.1	hypothetical protein LOC100276154	-	2e+0	At5g65080	MAF5 (MADS AFFECTING FLOWERING 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-3	42	Arabidopsis thaliana	At2g30370	817587	allergen-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.CL1351Contig1_at	PsAffx.CL1351Contig1	-	-	4e+0	At3g09735	DNA-binding S1FA family protein	C.G.	S.X.	Please select
0.03	6e-1	34	Hordeum vulgare	Contig13998_at	Contig13998	-	-	2e+0	At1g36240	60S ribosomal protein L30 (RPL30A)	C.G.	S.X.	Please select
0.03	2e-1	38	Oryza sativa	OsAffx.22583.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e-1	38	Populus trichocarpa	PtpAffx.200604.1.S1_x_at	pmrna1188	hypothetical protein	-	3e-1	At1g10747	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.63	0	702	Triticum aestivum	TaAffx.112283.1.S1_at	CA622230	-	-	6e+0	At5g66370	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1621151_at	CB971601	hypothetical protein LOC100260643	-	3e-1	At3g07260	forkhead-associated domain-containing protein / FHA domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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