Gene omics information

Query gene ID	Zm.14951.1.A1_at
Gene name	cell wall protein (put.); putative
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.14951.1.A1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	S.X.	H.G.	Please select
0.80	94.0	Zm.16904.2.A1_at	BM381185	-	-	6e+0	At5g57565	protein kinase family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.4044.1.A1_at	AY109936.1	hypothetical protein LOC100273897 /// hypothetical protein LOC100274738	-	5e+0	At5g13780	GCN5-related N-acetyltransferase, putative	S.X.	H.G.	Please select
0.50	65.7	Zm.15655.1.A1_at	CF627617	hypothetical protein LOC100279251	-	9e-12	At1g65950	ABC1 family protein	S.X.	H.G.	Please select
0.43	52.8	Zm.6569.2.S1_a_at	AY107413.1	hypothetical protein LOC100276303	-	1e+0	At3g59900	ARGOS (AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE)	S.X.	H.G.	Please select
0.21	15.5	Zm.15906.1.A1_at	AI622748	-	-	6e-6	At1g17290	AlaAT1 (ALANINE AMINOTRANSFERAS)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
51.3	100.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
41.7	99.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.9	99.3	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
18.7	99.2	GSM320461	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.0	99.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320459	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.0	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320473	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1316	Zm.14951.1.S1_x_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
1.00	0	1316	Zm.14951.1.S1_a_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
1.00	0	1316	Zm.14951.1.S1_at	M36914.1	cell wall protein (put.); putative	-	5e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.36	0	716	Zm.162.1.A1_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.36	0	716	Zm.162.1.A1_x_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.32	2e-136	484	Zm.14951.2.S1_x_at	BG837389	-	-	9e-3	At2g30370	allergen-related	C.G.	S.X.	Please select
0.27	5e-103	373	Zm.14951.3.S1_x_at	BQ048061	-	-	6e-1	At5g66370	unknown protein	C.G.	S.X.	Please select
0.01	1e-1	36	Zm.2059.1.S1_at	AI746127	-	-	1e-86	At3g58610	ketol-acid reductoisomerase	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.9546.1.A1_at	AY105569.1	hypothetical protein LOC100276154	-	2e+0	At5g65080	MAF5 (MADS AFFECTING FLOWERING 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-3	42	Arabidopsis thaliana	At2g30370	817587	allergen-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.CL1351Contig1_at	PsAffx.CL1351Contig1	-	-	4e+0	At3g09735	DNA-binding S1FA family protein	C.G.	S.X.	Please select
0.03	6e-1	34	Hordeum vulgare	Contig13998_at	Contig13998	-	-	2e+0	At1g36240	60S ribosomal protein L30 (RPL30A)	C.G.	S.X.	Please select
0.03	2e-1	38	Oryza sativa	OsAffx.22583.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e-1	38	Populus trichocarpa	PtpAffx.200604.1.S1_x_at	pmrna1188	hypothetical protein	-	3e-1	At1g10747	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.57	0	702	Triticum aestivum	TaAffx.112283.1.S1_at	CA622230	-	-	6e+0	At5g66370	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1621151_at	CB971601	hypothetical protein LOC100260643	-	3e-1	At3g07260	forkhead-associated domain-containing protein / FHA domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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