Gene omics information

Query gene ID	Zm.14844.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.51	66.4	Zm.14844.1.A1_at	AY110776.1	-	-	2e-9	At1g56045	ribosomal protein L41 family protein	S.X.	H.G.	Please select
0.73	89.9	Zm.12369.1.S1_at	AY107124.1	-	-	2e+1	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	S.X.	H.G.	Please select
0.70	87.0	ZmAffx.536.1.A1_at	AI711796	-	-	1e+1	At5g65430	GRF8 (GENERAL REGULATORY FACTOR 8)	S.X.	H.G.	Please select
0.57	75.1	Zm.2611.1.A1_a_at	BM348249	hypothetical protein LOC100278318	-	3e-1	At1g49820	ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE)	S.X.	H.G.	Please select
0.54	69.8	Zm.2823.1.A1_at	BI097694	ankyrin protein kinase-like	-	2e+1	At5g40260	nodulin MtN3 family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.1316.1.A1_at	AY106193.1	hypothetical protein LOC100194245	-	1e-24	At5g61240	protein binding	S.X.	H.G.	Please select
0.47	59.9	Zm.7770.1.A1_at	CF632652	hypothetical protein LOC100274956	-	7e-1	At1g53935	unknown protein	S.X.	H.G.	Please select
0.44	55.7	ZmAffx.531.1.A1_at	AI711719	-	-	8e-1	At5g20370	serine-rich protein-related	S.X.	H.G.	Please select
0.44	55.7	Zm.12678.2.S1_at	CN844593	-	-	8e-11	At3g05030	NHX2 (SODIUM HYDROGEN EXCHANGER 2)	S.X.	H.G.	Please select
0.43	52.8	ZmAffx.718.1.S1_at	AI739895	-	-	8e-1	At1g14440	AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
48.9	100.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
41.2	99.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.4	99.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.0	99.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.1	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.5	98.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	4e-169	593	Zm.14844.1.S1_at	AY110776.1	-	-	2e-9	At1g56045	ribosomal protein L41 family protein	C.G.	S.X.	Please select
0.04	6e-23	107	Zm.6977.2.A1_at	CF624814	hypothetical protein LOC100192796 /// hypothetical protein LOC100276045 /// hypothetical protein LOC100277812 /// hypothetical protein LOC100278532	-	4e-19	At3g48560	CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1)	C.G.	S.X.	Please select
0.09	6e-23	107	Zm.2895.7.A1_at	BQ164476	hypothetical protein LOC100275739	-	5e-18	At2g40205	60S ribosomal protein L41 (RPL41C)	C.G.	S.X.	Please select
0.08	2e-13	75	Zm.16056.1.S1_at	CD994891	hypothetical protein LOC100279380	-	1e-3	At3g11120	60S ribosomal protein L41 (RPL41E)	C.G.	S.X.	Please select
0.06	3e-12	71	Zm.1356.1.A1_at	T25260	hypothetical protein LOC100276909	-	9e-6	At2g40205	60S ribosomal protein L41 (RPL41C)	C.G.	S.X.	Please select
0.02	5e-2	38	Zm.12025.1.A1_at	CO532948	tim44-like domain containing protein	-	1e-2	At5g27395	P-P-bond-hydrolysis-driven protein transmembrane transporter	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.187.1.S1_at	CK370048	anionic peroxidase	-	1e-5	At5g40150	peroxidase, putative	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.649.1.A1_at	AI715077	-	-	3e+0	At4g22000	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	ZmAffx.649.1.S1_at	AI715077	-	-	3e+0	At4g22000	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	2e-9	63	Arabidopsis thaliana	At1g56045	2745833	ribosomal protein L41 family protein	F:structural constituent of ribosome;P:translation;C:ribosome;MPFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	8e-19	95	Glycine max	GmaAffx.89191.1.A1_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	C.G.	S.X.	Please select
0.11	2e-20	99	Hordeum vulgare	Contig726_x_at	Contig726	-	-	2e-13	At2g40205	60S ribosomal protein L41 (RPL41C)	C.G.	S.X.	Please select
0.10	1e-18	95	Oryza sativa	Os.27731.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.10	5e-17	89	Populus trichocarpa	PtpAffx.18438.1.A1_x_at	CV250284	-	-	4e-21	At3g08520	60S ribosomal protein L41 (RPL41D)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.30	5e-78	291	Triticum aestivum	Ta.17974.1.A1_at	CA623388	-	-	4e-11	At1g56045	ribosomal protein L41 family protein	C.G.	S.X.	Please select
0.10	1e-20	99	Vitis vinifera	1620501_at	CA817454	-	-	6e-23	At3g56020	60S ribosomal protein L41 (RPL41G)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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