Gene omics information

Query gene ID	Zm.14806.1.A1_at
Gene name	hypothetical protein LOC100217201
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.14806.1.A1_at	CF632779	hypothetical protein LOC100217201	-	1e-31	At1g66340	ETR1 (ETHYLENE RESPONSE 1)	S.X.	H.G.	Please select
0.83	95.6	Zm.16508.2.A1_at	CF018449	60S ribosomal protein L39 /// ribosomal protein L39	-	1e-15	At4g31985	60S ribosomal protein L39 (RPL39C)	S.X.	H.G.	Please select
0.67	85.8	Zm.7411.1.A1_at	BM072807	hypothetical protein LOC100277462	-	2e+0	At2g14390	unknown protein	S.X.	H.G.	Please select
0.60	77.8	Zm.16941.1.S1_at	AY105148.1	-	-	2e+1	At5g64310	AGP1 (ARABINOGALACTAN PROTEIN 1)	S.X.	H.G.	Please select
0.60	77.8	Zm.3468.1.A1_at	BM337587	FYVE zinc finger family protein	-	1e-2	At2g26210	ankyrin repeat family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.6139.2.A1_at	CF018619	methionyl-tRNA synthetase	-	1e-5	At2g40660	tRNA-binding region domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.5	97.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.8	95.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM206329	Right pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.0	94.0	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.0	94.0	GSM206326	Upper pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-1	38	ZmAffx.1050.1.A1_at	AI881808	-	-	3e+0	At4g35025	unknown protein	C.G.	S.X.	Please select
0.01	1e-1	38	ZmAffx.1050.1.S1_at	AI881808	-	-	3e+0	At4g35025	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	36	Zm.570.1.A1_at	AI692072	mitochondrial ribosomal protein S10	-	6e+0	At5g56880	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	36	Zm.18683.1.S1_at	CF637245	protein binding protein	-	1e-14	At3g47550	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	ZmAffx.175.1.A1_at	AI668276	-	-	3e+0	At3g06820	mov34 family protein	C.G.	S.X.	Please select
0.01	2e+0	34	ZmAffx.175.1.S1_at	AI668276	Hypothetical protein LOC100216552	-	3e+0	At3g06820	mov34 family protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.9547.1.A1_at	CK827410	hypothetical protein LOC100193504	-	3e-27	At5g19910	SOH1 family protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.6785.1.A1_a_at	BU037307	S-adenosylmethionine decarboxylase proenzyme	-	3e-1	At3g02468	CPuORF9 (Conserved peptide upstream open reading frame 9)	C.G.	S.X.	Please select
0.01	2e+0	34	Zm.513.1.S1_at	AF250050.1	retinoblastoma-related protein 1	-	2e-6	At3g12280	RBR1 (RETINOBLASTOMA-RELATED 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	1e-31	139	Arabidopsis thaliana	At1g66340	842951	ETR1 (ETHYLENE RESPONSE 1)	Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	4e-29	131	Glycine max	Gma.10803.2.S1_a_at	AW760011	-	-	2e-11	At2g40940	ERS1 (ETHYLENE RESPONSE SENSOR 1)	C.G.	S.X.	Please select
0.63	0	1435	Hordeum vulgare	Contig7187_at	Contig7187	-	-	6e-52	At1g66340	ETR1 (ETHYLENE RESPONSE 1)	C.G.	S.X.	Please select
0.66	0	1782	Oryza sativa	Os03g0701700	AF013979.1	-	Ethylene receptor	8e-42	At1g66340	ETR1 (ETHYLENE RESPONSE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.17	3e-42	174	Populus trichocarpa	PtpAffx.145807.1.S1_at	CX184416	ethylene receptor 1	-	1e-31	At2g40940	ERS1 (ETHYLENE RESPONSE SENSOR 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.50	0	1120	Triticum aestivum	Ta.10139.1.S1_at	BJ309587	ethylene receptor-like protein	-	2e-41	At1g66340	ETR1 (ETHYLENE RESPONSE 1)	C.G.	S.X.	Please select
0.24	3e-20	99	Vitis vinifera	1609317_at	AF243474.1	ethylene receptor-like	-	5e-102	At1g66340	ETR1 (ETHYLENE RESPONSE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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