Gene omics information

Query gene ID	Zm.14784.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.93	99.3	Zm.14784.1.S1_at	AI795527	-	-	3e+0	At3g01175	-	S.X.	H.G.	Please select
0.44	55.7	ZmAffx.1198.1.S1_at	BE056195	-	-	2e-1	At1g75040	PR5 (PATHOGENESIS-RELATED GENE 5)	S.X.	H.G.	Please select
0.43	52.8	Zm.3566.1.A1_at	BG873859	-	-	1e+0	At3g23140	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.29	28.1	Zm.18556.1.S1_at	CO049296	versicolorin reductase	-	3e+0	At1g11230	unknown protein	S.X.	H.G.	Please select
0.24	19.8	ZmAffx.96.1.A1_at	AI665410	hydroquinone glucosyltransferase	-	1e+1	At4g39130	dehydrin family protein	S.X.	H.G.	Please select
0.23	18.6	Zm.18085.1.S1_at	CK986038	hypothetical protein LOC100274126	-	5e-11	At5g13800	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select
0.23	18.6	Zm.469.1.A1_at	AF178952.1	voltage-dependent anion channel protein 2	-	2e-4	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	S.X.	H.G.	Please select
0.16	9.4	Zm.16024.1.S1_a_at	AF298769.1	40S ribosomal protein S24	-	1e-26	At3g04920	40S ribosomal protein S24 (RPS24A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.4	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.8	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.8	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.7	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.67	0	1778	Zm.14784.1.A1_at	BG841481	-	-	3e+0	At3g01175	-	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1967.2.A1_at	CF637323	pre-mRNA-splicing factor prp45	-	6e-26	At1g77180	chromatin protein family	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1967.1.A1_at	BG836522	pathogenesis-related protein 10 /// pathogenesis-related protein 1	-	1e-23	At1g77180	chromatin protein family	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1935.1.S1_at	BU050248	ferrochelatase-2	-	4e-15	At5g26030	FC1 (ferrochelatase 1)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.1.S1_a_at	AF034947.1	inorganic pyrophosphatase /// soluble inorganic pyrophosphatase	-	3e-40	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.1.S1_x_at	AF034947.1	inorganic pyrophosphatase	-	3e-40	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.2.A1_at	CF630684	soluble inorganic pyrophosphatase	-	3e-33	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.1.S1_at	AF034947.1	inorganic pyrophosphatase	-	3e-40	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.8887.1.A1_at	BM336157	rhodanese-like domain containing protein	-	1e-7	At4g27700	rhodanese-like domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	34	Arabidopsis thaliana	At3g01175	820400	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-5	52	Glycine max	GmaAffx.772.1.S1_at	BE821626	-	-	1e-2	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please select
0.44	2e-73	276	Hordeum vulgare	Contig15344_at	Contig15344	-	-	4e-1	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please select
0.40	7e-98	359	Oryza sativa	Os03g0740700	AK102723.1	-	Protein similar to CwfJ, C-terminal 1 domaincontaining protein	3e-4	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e-1	38	Populus trichocarpa	PtpAffx.210027.1.S1_at	pmrna19761	-	-	3e-3	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.41	6e-94	345	Triticum aestivum	Ta.22058.1.S1_at	CA718211	-	-	2e+0	At4g17900	zinc-binding family protein	C.G.	S.X.	Please select
0.02	5e-2	38	Vitis vinifera	1619248_at	CA813733	hypothetical protein LOC100264750	-	3e-1	At5g18100	CSD3 (copper/zinc superoxide dismutase 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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