Gene omics information

Query gene ID	Zm.14784.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	89.9	Zm.14784.1.A1_at	BG841481	-	-	3e+0	At3g01175	-	S.X.	H.G.	Please select
0.73	89.9	Zm.4359.2.A1_x_at	AI795776	EMB2756	-	2e+0	At5g52160	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.71	88.2	ZmAffx.459.1.S1_at	AI677212	-	-	8e-1	At1g26910	60S ribosomal protein L10 (RPL10B)	S.X.	H.G.	Please select
0.56	74.4	Zm.13162.1.A1_at	CO521967	-	-	9e-3	At3g02040	SRG3 (senescence-related gene 3)	S.X.	H.G.	Please select
0.56	74.4	Zm.14074.1.A1_at	AY104605.1	-	-	2e-11	At1g07110	F2KP (FRUCTOSE-2,6-BISPHOSPHATASE)	S.X.	H.G.	Please select
0.54	69.8	ZmAffx.734.1.A1_at	AI740044	-	-	1e+1	At5g01670	aldose reductase, putative	S.X.	H.G.	Please select
0.53	69.1	Zm.13658.1.A1_at	AY107148.1	hypothetical protein LOC100193262	-	1e+0	At3g50350	unknown protein	S.X.	H.G.	Please select
0.53	69.1	Zm.6961.1.A1_at	AY104000.1	hypothetical protein LOC100191822	-	3e-18	At3g03340	UNE6 (unfertilized embryo sac 6)	S.X.	H.G.	Please select
0.42	51.3	Zm.18993.1.S1_at	CO528827	-	-	3e-3	At2g10950	BSD domain-containing protein	S.X.	H.G.	Please select
0.40	48.5	Zm.6557.1.S1_at	CF635193	-	-	4e-34	At1g10290	ADL6 (DYNAMIN-LIKE PROTEIN 6)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
39.4	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.0	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.4	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.5	99.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.7	99.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.9	99.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.5	99.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.2	99.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.0	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.66	0	1776	Zm.14784.1.S1_at	AI795527	-	-	3e+0	At3g01175	-	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1967.2.A1_at	CF637323	pre-mRNA-splicing factor prp45	-	6e-26	At1g77180	chromatin protein family	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1967.1.A1_at	BG836522	pathogenesis-related protein 10 /// pathogenesis-related protein 1	-	1e-23	At1g77180	chromatin protein family	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1935.1.S1_at	BU050248	ferrochelatase-2	-	4e-15	At5g26030	FC1 (ferrochelatase 1)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.1.S1_a_at	AF034947.1	inorganic pyrophosphatase /// soluble inorganic pyrophosphatase	-	3e-40	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.1.S1_x_at	AF034947.1	inorganic pyrophosphatase	-	3e-40	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.2.A1_at	CF630684	soluble inorganic pyrophosphatase	-	3e-33	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1738.1.S1_at	AF034947.1	inorganic pyrophosphatase	-	3e-40	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	C.G.	S.X.	Please select
0.01	5e+0	32	Zm.8887.1.A1_at	BM336157	rhodanese-like domain containing protein	-	1e-7	At4g27700	rhodanese-like domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e+0	34	Arabidopsis thaliana	At3g01175	820400	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e-5	52	Glycine max	GmaAffx.772.1.S1_at	BE821626	-	-	1e-2	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please select
0.26	2e-73	276	Hordeum vulgare	Contig15344_at	Contig15344	-	-	4e-1	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please select
0.18	7e-98	359	Oryza sativa	Os03g0740700	AK102723.1	-	Protein similar to CwfJ, C-terminal 1 domaincontaining protein	3e-4	At1g56290	CwfJ-like family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	1e-2	42	Populus trichocarpa	PtpAffx.13671.1.S1_at	CV226095	hypothetical protein	-	4e-20	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	6e-94	345	Triticum aestivum	Ta.22058.1.S1_at	CA718211	-	-	2e+0	At4g17900	zinc-binding family protein	C.G.	S.X.	Please select
0.08	5e-2	38	Vitis vinifera	1619248_at	CA813733	hypothetical protein LOC100264750	-	3e-1	At5g18100	CSD3 (copper/zinc superoxide dismutase 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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