Gene omics information

Query gene ID	Zm.14760.1.A1_at
Gene name	Ubiquitin-conjugating enzyme E2
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.2	Zm.14760.1.A1_at	AY104289.1	Ubiquitin-conjugating enzyme E2	-	2e+0	At2g13980	nucleic acid binding	S.X.	H.G.	Please select
0.73	89.9	Zm.1779.1.A1_at	CF020941	-	-	1e+1	At5g64020	unknown protein	S.X.	H.G.	Please select
0.71	88.2	Zm.15490.1.A1_at	CD448845	subtilisin-chymotrypsin inhibitor CI-1B	-	4e+0	At5g38930	germin-like protein, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.16805.6.S1_x_at	BG320419	ADP-ribosylation factor 1	-	2e-99	At1g10630	ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)	S.X.	H.G.	Please select
0.67	85.8	ZmAffx.592.1.S1_at	AI715020	-	-	1e+1	At3g12300	unknown protein	S.X.	H.G.	Please select
0.29	28.1	Zm.3084.1.A1_at	CA404291	hypothetical protein LOC100216830	-	9e-1	At5g56600	PRF3 (PROFILIN 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
32.9	99.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.6	99.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.5	99.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.3	99.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.7	99.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.6	99.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.2	99.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.9	99.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	2060	Zm.14760.1.S1_at	AY104289.1	Ubiquitin-conjugating enzyme E2	-	2e+0	At2g13980	nucleic acid binding	C.G.	S.X.	Please select
0.21	2e-60	232	Zm.13082.1.S1_at	CD438478	-	-	1e-1	At3g49800	BSD domain-containing protein	C.G.	S.X.	Please select
0.21	2e-60	232	Zm.13082.1.S1_a_at	CD438478	-	-	1e-1	At3g49800	BSD domain-containing protein	C.G.	S.X.	Please select
0.07	2e-4	46	Zm.16983.1.A1_at	AY107293.1	-	-	2e+0	At3g14670	unknown protein	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.13571.1.S1_at	CO527735	hypothetical protein LOC100279613	-	3e+0	At1g53030	cytochrome c oxidase copper chaperone family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.12386.1.A1_at	CF630849	speckle-type POZ protein	-	7e+0	At3g44935	unknown protein	C.G.	S.X.	Please select
0.02	9e-1	34	Zm.2543.1.A1_at	CF634473	-	-	4e-45	At1g74030	enolase, putative	C.G.	S.X.	Please select
0.01	4e+0	32	ZmAffx.1219.1.S1_s_at	40794996-166	-	-	2e-1	At1g13760	unknown protein	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.6962.1.S1_at	CA404020	sorbitol dehydrogenase	-	2e-1	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	At2g13980	815882	nucleic acid binding	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-2	42	Glycine max	GmaAffx.71580.1.S1_at	AW832468	-	-	5e-77	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	C.G.	S.X.	Please select
0.22	4e-37	155	Hordeum vulgare	Contig25679_at	Contig25679	-	-	2e-2	At1g58150	unknown protein	C.G.	S.X.	Please select
0.25	4e-83	309	Oryza sativa	Os05g0557600	AK121717.1	-	Ubiquitin-conjugating enzymes domain containingprotein	3e-4	At3g15355	UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-3	44	Populus trichocarpa	PtpAffx.204523.1.S1_at	pmrna8873	hypothetical protein	-	8e-39	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	2e-68	260	Triticum aestivum	Ta.16231.1.A1_at	CA602987	-	-	5e+0	At5g11410	protein kinase family protein	C.G.	S.X.	Please select
0.06	3e-12	71	Vitis vinifera	1622788_at	CB920325	hypothetical protein LOC100262286	-	1e-1	At3g15355	UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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