Gene omics information

Query gene ID	Zm.14706.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.86	96.3	Zm.14706.1.S1_at	AY103710.1	-	-	2e-3	At4g27230	HTA2 (histone H2A)	S.X.	H.G.	Please select
0.88	96.7	Zm.10811.2.S1_at	BM079148	-	-	8e+0	At4g14730	transmembrane protein-related	S.X.	H.G.	Please select
0.85	95.9	Zm.3942.1.A1_at	CD998416	hypothetical protein LOC100192575	-	2e-7	At1g35190	oxidoreductase, 2OG-Fe(II) oxygenase family protein	S.X.	H.G.	Please select
0.85	95.9	Zm.8973.1.S1_a_at	CF058354	hypothetical protein LOC100191732	-	2e-2	At2g18770	signal recognition particle binding	S.X.	H.G.	Please select
0.76	91.1	Zm.1438.1.S1_at	BM073074	hypothetical protein LOC100191302	-	2e-13	At4g01100	ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1)	S.X.	H.G.	Please select
0.74	90.3	Zm.3845.2.A1_at	CA403952	hypothetical protein LOC100272900	-	2e-50	At3g15020	malate dehydrogenase (NAD), mitochondrial, putative	S.X.	H.G.	Please select
0.74	90.3	Zm.14513.4.S1_at	CK827180	hypothetical protein LOC100192746	-	7e-31	At1g09200	histone H3	S.X.	H.G.	Please select
0.74	90.3	Zm.9641.1.A1_at	BM349151	-	-	1e-3	At5g10980	histone H3	S.X.	H.G.	Please select
0.73	89.9	Zm.17408.1.A1_at	BE129731	hypothetical protein LOC100273071	-	4e-1	At2g41380	embryo-abundant protein-related	S.X.	H.G.	Please select
0.71	88.2	Zm.10807.2.S1_a_at	CD970321	hypothetical protein LOC100280257	-	4e-22	At3g16060	kinesin motor family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.3	94.7	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.1	94.3	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.0	94.0	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.9	93.8	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.9	93.8	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.7	93.2	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.7	93.2	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	1e-159	561	Zm.6752.1.A1_at	CK826604	splicing factor, arginine/serine-rich 2	-	2e-6	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.50	1e-144	511	Zm.16911.1.A1_at	BM332269	-	-	3e-11	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.58	6e-143	506	Zm.16259.1.A1_x_at	BQ539455	hypothetical protein LOC100273269	-	1e-6	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.51	4e-138	490	Zm.16259.2.A1_x_at	CD951359	hypothetical protein LOC100273269	-	4e-7	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.46	3e-126	450	Zm.15894.1.A1_at	BG873874	-	-	3e-14	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.41	6e-109	393	Zm.13443.1.A1_at	U08225.1	Histone H2A	-	4e-11	At5g02560	HTA12	C.G.	S.X.	Please select
0.41	2e-87	321	Zm.13002.1.S1_at	CF041204	-	-	1e-10	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.32	9e-62	236	Zm.888.1.S1_at	CK828040	hypothetical protein LOC100216750	-	1e-7	At1g08880	H2AXA	C.G.	S.X.	Please select
0.27	2e-32	139	Zm.6778.1.S1_at	AY105006.1	-	-	2e-15	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	2e-3	44	Arabidopsis thaliana	At4g27230	828831	HTA2 (histone H2A)	Encodes HTA2, a histone H2A protein.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.37	1e-23	111	Glycine max	PsAffx.C4000035_at	PsAffx.C4000035	-	-	4e+0	At5g59870	HTA6	C.G.	S.X.	Please select
0.55	3e-139	494	Hordeum vulgare	Contig118_at	Contig118	-	-	6e-12	At1g08880	H2AXA	C.G.	S.X.	Please select
0.53	1e-122	440	Oryza sativa	Os03g0279200	CA753594	-	Histone H2A	1e-7	At5g02560	HTA12	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	3e-2	40	Populus trichocarpa	Ptp.6807.1.S1_at	DN499732	histone 2	-	6e-27	At1g08880	H2AXA	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.57	2e-132	472	Triticum aestivum	TaAffx.128686.3.A1_at	BQ802458	-	-	3e-1	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select
0.14	1e-7	56	Vitis vinifera	1608056_at	CF511408	hypothetical protein LOC100254490	-	4e-31	At1g08880	H2AXA	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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