CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14696.2.A1_a_at

Gene name ribosome biogenesis protein NEP1

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.6 Zm.14696.2.A1_a_at AW507051 ribosome biogenesis protein NEP1 - 4e+0 At5g55990 CBL2 (CALCINEURIN B-LIKE 2) S.X. H.G.
0.50 65.7 Zm.1414.1.S1_at BQ293805 hypothetical protein LOC100191409 - 2e+0 At2g21185 unknown protein S.X. H.G.
0.07 2.9 Zm.1423.1.A1_at CF047935 RING zinc finger protein-like - 2e-7 At1g69330 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.07 2.9 Zm.8186.1.A1_at BM073199 hypothetical protein LOC100191549 - 4e-8 At5g17330 GAD S.X. H.G.
0.06 2.3 Zm.15843.1.S1_at CD988927 hypothetical protein LOC100275209 - 9e-1 At2g39770 CYT1 (CYTOKINESIS DEFECTIVE 1) S.X. H.G.
0.03 1.1 Zm.368.1.A1_at AF020813.1 glucose-6-phosphate/phosphate-translocator precursor - 4e-37 At1g61800 GPT2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.3 94.7 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.3 94.7 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.0 94.0 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.9 93.8 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.8 93.5 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.7 93.2 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.7 93.2 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.7 93.2 GSM205368 B73xMo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1152 Zm.14696.2.S1_at AW507051 - - 4e+0 At5g55990 CBL2 (CALCINEURIN B-LIKE 2) C.G. S.X.
0.01 5e-1 34 Zm.18811.1.A1_at CK985724 deoxy xylulose synthase 1 - 6e-6 At4g15560 CLA1 (CLOROPLASTOS ALTERADOS 1) C.G. S.X.
0.02 2e+0 32 Zm.8132.1.A1_at BM347350 hypothetical protein LOC100280330 - 2e-7 At3g05545 transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein C.G. S.X.
0.01 2e+0 32 Zm.6119.1.A1_at AY105312.1 - - 4e-3 At2g28380 DRB2 (DSRNA-BINDING PROTEIN 2) C.G. S.X.
0.02 2e+0 32 Zm.4982.1.A1_at CO531401 ubiquitin-conjugating enzyme E2-22 kDa - 3e-5 At5g50870 UBC27 (ubiquitin-conjugating enzyme 27) C.G. S.X.
0.01 2e+0 32 Zm.4902.1.A1_at CO520120 hypothetical protein LOC100193758 - 3e-16 At5g21326 protein kinase family protein / NAF domain-containing protein C.G. S.X.
0.02 2e+0 32 Zm.14025.1.S1_at AY109107.1 crcB-like protein - 2e+0 At3g51940 unknown protein C.G. S.X.
0.01 8e+0 30 Zm.8930.1.A2_at CF634895 - - 3e-7 At3g56460 oxidoreductase, zinc-binding dehydrogenase family protein C.G. S.X.
0.01 8e+0 30 Zm.8930.1.A1_at BM074751 oxidoreductase/ zinc ion binding protein - 3e-7 At3g56460 oxidoreductase, zinc-binding dehydrogenase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g55990 835697 CBL2 (CALCINEURIN B-LIKE 2) Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family. - - - C.G. S.X.
0.06 1e-1 38 Glycine max Gma.12022.1.S1_at BM178850 - - 4e-8 At3g57000 nucleolar essential protein-related C.G. S.X.
0.55 3e-107 387 Hordeum vulgare Contig6041_at Contig6041 - - 2e-1 At3g57000 nucleolar essential protein-related C.G. S.X.
0.53 6e-121 434 Oryza sativa Os.9478.1.S1_at - - - 0 C.G. S.X.
0.09 2e+0 34 Populus trichocarpa PtpAffx.137676.1.S1_at CV249047 hypothetical protein - 2e-16 At3g57000 nucleolar essential protein-related C.G. S.X.
0.49 2e-101 369 Triticum aestivum Ta.3294.1.S1_at BJ215822 - - 5e-5 At3g57000 nucleolar essential protein-related C.G. S.X.
0.10 2e-5 48 Vitis vinifera 1611600_at CD719533 - - 8e-18 At3g57000 nucleolar essential protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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