CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14664.1.A1_at

Gene name hypothetical protein LOC100274353

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.14664.1.A1_at BM379705 hypothetical protein LOC100274353 - 9e-1 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) S.X. H.G.
0.67 85.8 Zm.3180.1.A1_at AW179477 - - 7e-1 At1g32700 zinc-binding family protein S.X. H.G.
0.57 75.1 Zm.18127.1.S1_at CN845217 membrin 11 - 1e-8 At5g50440 MEMB12 (MEMBRIN 12) S.X. H.G.
0.36 41.3 ZmAffx.607.1.A1_at AI715035 - - 3e+0 At1g78150 unknown protein S.X. H.G.
0.28 28.1 ZmAffx.1019.1.S1_at AI881532 - - 3e+0 At2g29070 ubiquitin fusion degradation UFD1 family protein S.X. H.G.
0.20 14.2 ZmAffx.597.1.A1_at AI715025 - - 8e-1 At1g43260 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
41.7 99.9 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
33.1 99.9 GSM162264 Mutant 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
22.7 99.5 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
18.4 99.2 GSM162265 Wild type 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
16.1 99.0 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
12.5 98.7 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
8.8 98.1 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
8.7 98.1 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.5 97.1 GSM375794 Deep-sowing 10d treatment UCZ, biological rep1 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
5.2 96.9 GSM385707 Deep-sowing 10d treatment IAA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 2e-80 297 Zm.2258.1.A1_at AY112615.1 - - 1e+0 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
0.35 2e-80 297 Zm.2258.1.S1_at AW927712 - - 1e+0 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
0.01 1e-1 36 Zm.3865.1.A1_at CA403460 - - 7e-70 At3g16950 LPD1 (LIPOAMIDE DEHYDROGENASE 1) C.G. S.X.
0.03 4e-1 34 Zm.9758.1.A1_at BM332963 - - 4e+0 At4g39190 unknown protein C.G. S.X.
0.02 4e-1 34 Zm.8321.1.S1_at CO528265 calcium-dependent protein kinase, isoform AK1 - 3e+0 At5g61350 protein kinase family protein C.G. S.X.
0.02 4e-1 34 Zm.6412.1.S1_at BI096715 hypothetical protein LOC100276959 - 5e-1 At2g01340 unknown protein C.G. S.X.
0.02 4e-1 34 Zm.1926.1.A1_at CO521075 hypothetical protein LOC100192826 - 8e-9 At1g24440 protein binding / zinc ion binding C.G. S.X.
0.02 4e-1 34 Zm.13496.1.A1_at CF632086 Hypothetical protein LOC100216619 - 3e-5 At5g60550 GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2) C.G. S.X.
0.01 4e-1 34 Zm.13263.1.A1_at AY109418.1 nitrite reductase - 1e+0 At2g15620 NIR1 (NITRITE REDUCTASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 9e-1 34 Arabidopsis thaliana At3g49570 824119 LSU3 (RESPONSE TO LOW SULFUR 3) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM - - - C.G. S.X.
0.09 8e-5 48 Glycine max Gma.15811.1.S1_x_at CD403601 - - 6e-5 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
0.07 2e-9 61 Hordeum vulgare Contig21281_at Contig21281 - - 3e-1 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
0.30 2e-37 157 Oryza sativa OsAffx.20211.1.S1_at - - - 0 C.G. S.X.
0.08 1e+0 34 Populus trichocarpa PtpAffx.17584.1.A1_at CX170552 hypothetical protein - 4e-1 At5g24655 LSU4 (RESPONSE TO LOW SULFUR 4) C.G. S.X.
0.20 6e-39 161 Triticum aestivum Ta.26108.1.A1_s_at CK214709 - - 7e-3 At3g49570 LSU3 (RESPONSE TO LOW SULFUR 3) C.G. S.X.
0.03 4e+0 30 Vitis vinifera 1615730_at CD799263 - - 8e-1 At2g24150 HHP3 (heptahelical protein 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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