Gene omics information

Query gene ID	Zm.14617.1.A1_at
Gene name	Hypothetical protein LOC100191188
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.14617.1.A1_at	BM080453	Hypothetical protein LOC100191188	-	2e+0	At2g33130	RALFL18 (ralf-like 18)	S.X.	H.G.	Please select
0.83	95.6	Zm.4194.1.A1_at	AI861230	hypothetical protein LOC100276018	-	3e+0	At1g71180	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	S.X.	H.G.	Please select
0.80	94.0	Zm.13975.1.A1_at	CK985455	carbonyl reductase 3	-	6e-1	At4g20880	ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)	S.X.	H.G.	Please select
0.77	92.1	Zm.4853.1.S1_at	CD439703	-	-	2e-1	At2g45070	SEC61 BETA	S.X.	H.G.	Please select
0.73	89.9	ZmAffx.714.1.S1_at	AI739758	-	-	1e+1	At5g66930	unknown protein	S.X.	H.G.	Please select
0.40	48.5	Zm.12300.1.A1_at	CF626520	ruBisCO large subunit-binding protein subunit alpha	-	1e-37	At2g28000	CPN60A (CHAPERONIN-60ALPHA)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
39.7	99.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
33.7	99.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.2	99.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.8	99.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.9	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.6	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.8	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	5e-20	97	Zm.3900.2.A1_at	BM267197	hypothetical protein LOC100191188	-	1e-17	At3g59580	RWP-RK domain-containing protein	C.G.	S.X.	Please select
0.07	7e-7	54	Zm.11914.1.A1_at	BM381776	-	-	5e+0	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	C.G.	S.X.	Please select
0.01	6e-1	34	Zm.5894.1.A1_at	AY104468.1	transferase, transferring glycosyl groups	-	1e-8	At4g32120	galactosyltransferase family protein	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.1780.1.A1_at	CF629323	hypothetical protein LOC100274241	-	4e-2	At5g09400	KUP7	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.4692.1.A1_at	AI738236	-	-	1e+0	At1g63470	DNA-binding family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.354.1.S1_at	AY505017.1	glossy1	-	7e-2	At4g19150	ankyrin repeat family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.2445.1.A1_at	BM073017	-	-	7e-2	At3g21390	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.18016.1.S1_at	CF047687	-	-	1e-12	At3g52190	PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.12481.1.A1_at	AI920547	-	-	4e+0	At3g30845	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At2g33130	817875	RALFL18 (ralf-like 18)	Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	2e+0	34	Glycine max	GmaAffx.83332.2.S1_at	AW832265	-	-	2e+0	At4g39470	chloroplast lumen common family protein	C.G.	S.X.	Please select
0.03	3e+0	32	Hordeum vulgare	Contig26268_at	Contig26268	-	-	6e-2	At3g06300	AT-P4H-2 (A. THALIANA P4H ISOFORM 2)	C.G.	S.X.	Please select
0.03	2e-1	38	Oryza sativa	Os01g0111300	AK105004.2	-	Conserved hypothetical protein	2e+0	At5g10450	GRF6 (G-box regulating factor 6)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	8e+0	32	Populus trichocarpa	PtpAffx.92521.1.S1_at	CA928526	hypothetical protein	-	5e-3	At3g07910	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e-1	38	Triticum aestivum	Ta.2984.1.S1_at	BJ209415	-	-	5e+0	At3g44805	-	C.G.	S.X.	Please select
0.03	1e-1	36	Vitis vinifera	1612999_at	CF513786	hypothetical protein LOC100261952	-	4e+0	At2g15590	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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