Gene omics information

Query gene ID	Zm.14497.5.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	89.9	Zm.14497.5.S1_at	CD440280	-	-	3e-21	At1g07790	HTB1	S.X.	H.G.	Please select
0.86	96.3	Zm.3601.1.A1_at	AW018168	-	-	7e+0	At4g26170	unknown protein	S.X.	H.G.	Please select
0.71	88.2	Zm.16820.1.S1_a_at	AW256125	hypothetical protein LOC100279930	-	9e-60	At2g18450	SDH1-2	S.X.	H.G.	Please select
0.61	79.5	Zm.16820.2.A1_at	AW053173	hypothetical protein LOC100280324	-	1e-15	At5g66760	SDH1-1	S.X.	H.G.	Please select
0.57	75.1	Zm.3747.1.S1_at	BM267525	-	-	3e-1	At2g42930	glycosyl hydrolase family protein 17	S.X.	H.G.	Please select
0.47	59.9	Zm.16994.2.A1_a_at	CF972506	methionine synthase	-	2e-82	At5g17920	ATMS1	S.X.	H.G.	Please select
0.47	59.9	Zm.9389.2.A1_x_at	BQ538340	catalytic/ protein phosphatase type 2C	-	1e+0	Atmg00980	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.3	94.7	GSM323170	Zm_SG200Dpep1_24hpi_I	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.3	94.7	GSM290555	CCR mutant M1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.2	94.5	GSM253273	ZM_4.5d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.1	94.3	GSM253272	ZM_4.5d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.0	94.0	GSM323172	Zm_SG200Dpep1_24hpi_III	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
3.0	94.0	GSM253252	ZM_24h_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
2.7	93.2	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.7	93.2	GSM258199	B14a 11-day seedling aerial tissue biological replicate 1	GSE10237	Gene expression variation among eight maize inbreds
2.7	93.2	GSM290556	CCR mutant M2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.7	93.2	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.53	0	737	Zm.14497.3.A1_at	CF012535	hypothetical protein LOC100274083	-	2e-15	At5g22880	HTB2	C.G.	S.X.	Please select
0.40	8e-143	506	Zm.14497.1.A1_at	U08226.1	histone H2B	-	1e-26	At1g07790	HTB1	C.G.	S.X.	Please select
0.37	2e-122	438	Zm.16065.2.A1_at	BM080549	Histone H2B.3	-	8e-15	At1g07790	HTB1	C.G.	S.X.	Please select
0.37	2e-122	438	Zm.16065.2.A1_s_at	BM080549	Histone H2B.3	-	8e-15	At1g07790	HTB1	C.G.	S.X.	Please select
0.37	2e-122	438	Zm.14497.4.A1_at	CF631109	-	-	4e-13	At1g07790	HTB1	C.G.	S.X.	Please select
0.40	2e-118	424	Zm.14497.11.S1_at	BQ619270	-	-	3e-8	At5g59910	HTB4	C.G.	S.X.	Please select
0.37	9e-118	422	Zm.16065.1.S1_at	CF602481	Histone H2B.1	-	7e-15	At1g07790	HTB1	C.G.	S.X.	Please select
0.39	6e-116	416	Zm.15914.3.A1_s_at	CF623792	Histone H2B.4	-	5e-19	At1g07790	HTB1	C.G.	S.X.	Please select
0.38	4e-114	410	Zm.14497.12.A1_at	CA404826	hypothetical protein LOC100192792	-	6e-22	At1g07790	HTB1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	3e-21	103	Arabidopsis thaliana	At1g07790	837293	HTB1	Encodes a histone 2B (H2B) protein.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.32	4e-36	153	Glycine max	Gma.16885.1.S1_at	AW570537	-	-	4e-31	At3g45980	HTB9	C.G.	S.X.	Please select
0.45	2e-153	541	Hordeum vulgare	Contig1136_at	Contig1136	-	-	7e-12	At1g07790	HTB1	C.G.	S.X.	Please select
0.43	5e-98	359	Oryza sativa	Os01g0839500	BE039851	-	Histone H2B (CaH2B)	3e-29	At1g07790	HTB1	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.23	1e-11	71	Populus trichocarpa	PtpAffx.1169.2.S1_s_at	CX657913	-	-	2e-42	At3g46030	HTB11	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.43	1e-140	500	Triticum aestivum	Ta.7378.1.S1_at	D37943.1	protein H2B-8	-	3e-20	At1g07790	HTB1	C.G.	S.X.	Please select
0.33	9e-31	133	Vitis vinifera	1615448_at	CF568935	-	-	1e-61	At5g59910	HTB4	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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