Gene omics information

Query gene ID	Zm.14476.2.A1_at
Gene name	Protein disulfide isomerase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.14476.2.A1_at	AY109949.1	Protein disulfide isomerase	-	1e-5	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	S.X.	H.G.	Please select
0.80	94.0	ZmAffx.936.1.S1_at	AI677620	-	-	3e+0	At3g10490	anac052 (Arabidopsis NAC domain containing protein 52)	S.X.	H.G.	Please select
0.67	85.8	Zm.13679.1.A1_at	AW424469	chemocyanin	-	9e-5	At1g72230	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.61	79.5	Zm.17521.1.S1_at	CK370540	complex 1 protein containing protein	-	2e+0	At4g39340	unknown protein	S.X.	H.G.	Please select
0.42	51.3	Zm.5313.2.A1_at	CA398418	60S ribosomal protein L12	-	9e-9	At2g37190	60S ribosomal protein L12 (RPL12A)	S.X.	H.G.	Please select
0.35	38.9	Zm.19357.1.A1_at	CO533449	pre-mRNA cleavage complex II protein Clp1	-	2e+0	At2g38465	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
33.9	99.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.4	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.5	99.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.7	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.1	99.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.6	99.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.6	99.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.9	99.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.0	95.8	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.69	0	1485	Zm.14476.2.S1_x_at	CF623745	protein disulfide isomerase	-	1e-5	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.69	0	1485	Zm.14476.2.S1_at	CF623745	protein disulfide isomerase	-	1e-5	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.36	0	843	Zm.14476.1.A1_a_at	AY105708.1	protein disulfide isomerase /// protein disulfide isomerase	-	1e-3	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	C.G.	S.X.	Please select
0.36	0	843	Zm.14476.1.A1_at	AY105708.1	protein disulfide isomerase	-	1e-3	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.6615.1.A1_at	AI629740	hypothetical protein LOC100274676	-	6e-3	At3g24440	VRN5 (VERNALIZATION 5)	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.8151.1.S1_at	AY105847.1	-	-	3e-1	At5g59760	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.18378.1.A1_at	CO521100	-	-	2e+0	At1g61520	LHCA3	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.9963.1.S1_at	AI737691	-	-	4e-68	At5g49910	CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2)	C.G.	S.X.	Please select
0.01	4e+0	32	Zm.8736.1.S1_at	BQ538695	-	-	7e-1	At3g09800	protein binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-5	52	Arabidopsis thaliana	At3g54960	824661	ATPDIL1-3 (PDI-LIKE 1-3)	Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e-7	57	Glycine max	Gma.2350.1.S1_at	BI970635	protein disulfide isomerase-like protein	-	1e-48	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	C.G.	S.X.	Please select
0.36	2e-66	252	Hordeum vulgare	Contig2400_at	Contig2400	-	-	4e-10	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.06	7e-42	173	Oryza sativa	Os02g0100100	AK071514.1	-	Protein disulphide isomerase family protein	2e-2	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	7e-23	109	Populus trichocarpa	PtpAffx.36782.1.A1_s_at	CV251407	hypothetical protein	-	2e-31	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.38	4e-85	315	Triticum aestivum	Ta.27038.1.S1_x_at	BT009566.1	-	-	4e-2	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.22	5e-8	57	Vitis vinifera	1616821_at	BQ795205	hypothetical protein LOC100256415	-	7e-31	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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