Gene omics information

Query gene ID	Zm.14474.1.S1_a_at
Gene name	hypothetical protein LOC100273044
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	71.6	Zm.14474.1.S1_a_at	CD001875	hypothetical protein LOC100273044	-	1e-33	At2g34560	katanin, putative	S.X.	H.G.	Please select
0.56	74.4	Zm.15213.1.A1_at	BM331832	-	-	3e+0	At5g67070	RALFL34 (ralf-like 34)	S.X.	H.G.	Please select
0.32	33.4	Zm.12547.1.A1_at	AI622168	RNA binding protein	-	1e-3	At4g03110	RNA-binding protein, putative	S.X.	H.G.	Please select
0.32	33.4	Zm.12385.1.S1_at	BQ578257	hypothetical protein LOC100274490	-	1e+0	At1g61660	basic helix-loop-helix (bHLH) family protein	S.X.	H.G.	Please select
0.26	22.7	Zm.8587.1.A1_at	BE997225	-	-	4e-1	At1g68845	unknown protein	S.X.	H.G.	Please select
0.22	16.9	Zm.3251.1.A1_at	CK145401	hypothetical protein LOC100280262	-	2e-3	At3g13180	NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.3	98.0	GSM202319	Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
8.1	98.0	GSM202310	B73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
8.1	98.0	GSM202318	B73xMo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
6.8	97.6	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
6.6	97.6	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.9	97.3	GSM202313	B73xMo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.9	97.3	GSM202314	Mo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.9	97.3	GSM202315	B73 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.6	97.1	GSM202322	B73x Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
5.4	97.0	GSM202320	B73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.93	0	3096	Zm.14474.1.A1_at	AY104519.1	-	-	1e-33	At2g34560	katanin, putative	C.G.	S.X.	Please select
0.36	1e-59	230	Zm.17628.1.S1_at	CN845468	-	-	6e-17	At2g34560	katanin, putative	C.G.	S.X.	Please select
0.01	2e-2	40	Zm.5322.3.A1_at	CF634067	-	-	8e-143	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.01	9e-2	38	Zm.7266.1.A1_at	BM333277	hypothetical protein LOC100274083 /// thioredoxin h1 protein	-	2e-3	At1g19730	ATTRX4	C.G.	S.X.	Please select
0.02	9e-2	38	Zm.5949.1.A1_at	AY108629.1	-	-	7e-2	At4g21560	VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)	C.G.	S.X.	Please select
0.02	9e-2	38	Zm.5949.1.S1_a_at	AY108629.1	-	-	7e-2	At4g21560	VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)	C.G.	S.X.	Please select
0.02	9e-2	38	Zm.13575.2.A1_at	BQ538921	DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide	-	4e-7	At3g59600	NRPB8B	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.4484.2.A1_at	AY108719.1	hypothetical protein LOC100272812	-	5e-11	At3g62770	AtATG18a	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.3484.1.A1_at	AW438127	hypothetical protein LOC100273241	-	2e+0	At1g67700	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	1e-33	145	Arabidopsis thaliana	At2g34560	818020	katanin, putative	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:unknown;OBMFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.31	2e-88	327	Glycine max	GmaAffx.1055.2.S1_at	BE347580	-	-	5e-54	At2g34560	katanin, putative	C.G.	S.X.	Please select
0.14	7e-40	165	Hordeum vulgare	Contig20237_at	Contig20237	-	-	1e+0	At1g61810	BGLU45 (BETA-GLUCOSIDASE 45)	C.G.	S.X.	Please select
0.50	0	1185	Oryza sativa	Os01g0757400	AB110177.1	-	SKD1 protein (Vacuolar sorting protein 4b)	2e-51	At2g34560	katanin, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.34	3e-72	274	Populus trichocarpa	PtpAffx.157374.1.S1_a_at	CK091516	hypothetical protein	-	2e-28	At2g34560	katanin, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.55	0	1001	Triticum aestivum	Ta.3044.1.S1_at	CK207710	-	-	3e-34	At2g34560	katanin, putative	C.G.	S.X.	Please select
0.35	1e-83	309	Vitis vinifera	1608494_at	CF603964	hypothetical protein LOC100253260	-	1e-76	At2g34560	katanin, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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